XLOC_021467



Basic Information


Item Value
gene id XLOC_021467
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 6851931 ~ 6865956 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00044777
AAAATGAGTTTGACAGTAAGATTCCTGACACACCAGGCAGGACTTGATGGCTTTGTATTTTGGTTTAGTACAGACGTCACACTGCACATCTCCAGCTCCAGCATAAACGTCAGCAGAAGGTTTAGTCTTCTTCAGTTTCTCCACCATTTCAGCCAGAATGGTGTTTTTAGCTAAAGCAGGTCTCGGCTTGAAGGTTTCTCTGCACTGAGGGCAGCTGTAGACTTTCTTCTCATCCTCCTGATTCCAGTGGTCTGTAATGCAGCTCTTACAGTAACTGTGTCCACAGTGGATGGCCACTGGGTCCTTCAGGAGATCCAGACACACTGAACACATGAATTCATTTTGATCCACAAAAATTCTTGCTTCTGCCATTTTACCTCATGAATACCAAAAGACACAAACACAGCTCAACTGCACTTCAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00044777 True 422 lncRNA 0.45 2 6851931 6865956

Neighbor


gene id symbol gene type direction distance location
XLOC_021465 si:ch211-117c9.5 coding upstream 10686 6795531 ~ 6841245 (+)
XLOC_021466 BX005466.1 coding upstream 26129 6825688 ~ 6825802 (+)
XLOC_021464 P4HTM coding upstream 62898 6752828 ~ 6789033 (+)
XLOC_021463 NA coding upstream 190067 6635085 ~ 6661864 (+)
XLOC_021462 rbm38 coding upstream 219825 6586467 ~ 6632106 (+)
XLOC_021468 si:ch211-117c9.1 coding downstream 60227 6926183 ~ 6943491 (+)
XLOC_021469 NA coding downstream 338583 7204539 ~ 7206195 (+)
XLOC_021470 si:dkeyp-73a2.2 coding downstream 484214 7350170 ~ 7355780 (+)
XLOC_021471 gata5 coding downstream 513772 7379728 ~ 7391028 (+)
XLOC_021472 NA coding downstream 536851 7402807 ~ 7435316 (+)
XLOC_021460 NA non-coding upstream 510243 6328346 ~ 6341688 (+)
XLOC_021455 CABZ01026153.1 non-coding upstream 929467 5871506 ~ 5922464 (+)
XLOC_021452 NA non-coding upstream 1228262 5595648 ~ 5623669 (+)
XLOC_021479 NA non-coding downstream 1922039 8787995 ~ 8811654 (+)
XLOC_021488 CU137717.1 non-coding downstream 2441618 9307574 ~ 9308561 (+)

Expression



Co-expression Network