G208371


Basic Information

Item Value
gene id G208371
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 96126230 ~ 96126852 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU235907
GCAAGGAAATGAATCATGTTTACTTAACAAATActgtgtatttttttattaagTGTAAATATTGCTACATGTGTTAAGTGCAAGGTACTGGTGAGAGAAAACCATTAGTCATTTAATCATCATCATGTGTCAACTACAGTATATAAAAATACAAGGCTAATGTTCTTGCTTAGAGGATAGGGAAGCATGTTTGGTTCTCATTGTAAAAGAtaatacatgtttgtttttttcaataATTATGGCAAATAAAGATGAATTTAGACAAAAAGAGTGCTATTTTACATTGGAACTTTCAAAGATGGGTATTTTGGTATGGGGTAGGAACTAGGAACTAGGAACTAGGAAGTAGCCTTGGCTCCCAGGCTTCACTCAAAAGGTGAGTTAGAAGTCTCTGACAGTCAGACAAACAGGGGGAGATTGACTGATCAGTGACCACTGTGTCACAGCAAAACAAAATGAGCTGTGTCAAGGTTGCAAAAATGTGACACATTATTCAAAATAATAAACAAAACTCTACAGTTTCACATGTTTAATGTCTCATAGTTTTGTGTGCATCCATCCGATTGGCAGGCCACACTGACAAGATATCAGAGGCAGgcgttatcacacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235907 True 623 lncRNA 0.36 1 96126230 96126852

Neighbor

gene id symbol gene type direction distance location
LOC110500533 LOC106561700 coding upstream 82660 96034220 ~ 96043570 (+)
LOC110500522 gpr22 coding upstream 115026 95993206 ~ 96011204 (+)
LOC118936882 NA coding upstream 238116 95885587 ~ 95888114 (+)
LOC110500485 hbp1 coding upstream 363087 95750879 ~ 95763143 (+)
LOC110500475 prkar2b coding upstream 379014 95731857 ~ 95747216 (+)
LOC110500557 LOC106561743 coding downstream 844539 96971391 ~ 97028188 (+)
LOC110500585 LOC106561739 coding downstream 955083 97081935 ~ 97085041 (+)
LOC110500594 LOC106561738 coding downstream 959077 97085929 ~ 97087755 (+)
LOC110500611 LOC106561734 coding downstream 1401855 97528707 ~ 97596323 (+)
LOC110533938 NA coding downstream 1478296 97605148 ~ 97606655 (+)
G208369 NA non-coding upstream 477 96125508 ~ 96125753 (+)
G208366 NA non-coding upstream 2956 96122892 ~ 96123274 (+)
G208364 NA non-coding upstream 4443 96121005 ~ 96121787 (+)
G208268 NA non-coding upstream 65841 96060129 ~ 96060389 (+)
G208267 NA non-coding upstream 68000 96058002 ~ 96058230 (+)
G208374 NA non-coding downstream 13079 96139931 ~ 96140548 (+)
G208376 NA non-coding downstream 15572 96142424 ~ 96142623 (+)
G208379 NA non-coding downstream 25673 96152525 ~ 96152824 (+)
G208380 NA non-coding downstream 28835 96155687 ~ 96155942 (+)
G208381 NA non-coding downstream 29548 96156400 ~ 96156635 (+)
G206926 NA other upstream 1419982 94705946 ~ 94706248 (+)
G206908 NA other upstream 1493963 94631829 ~ 94632267 (+)
G206850 NA other upstream 1564006 94557169 ~ 94562224 (+)
LOC110500139 LOC106561672 other upstream 1688548 94391364 ~ 94437682 (+)
G206389 LOC106561642 other upstream 2024358 94100979 ~ 94101872 (+)
G208404 NA other downstream 100941 96227793 ~ 96228463 (+)
G208836 NA other downstream 485577 96612429 ~ 96613459 (+)
G209586 NA other downstream 1359624 97486476 ~ 97486772 (+)
G209591 NA other downstream 1491765 97618617 ~ 97619089 (+)
LOC110500822 LOC106561728 other downstream 1571259 97695939 ~ 97711108 (+)

Expression


Co-expression Network