G208379


Basic Information

Item Value
gene id G208379
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 96152525 ~ 96152824 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU235916
CTCACCTGGTTACATCTCACCTGACTAGACTGTACAATACCTGTCCTCACCTGGTTACATCTCACCTGACTAGACTGTACAGTACCTGTCCTCACCTGGTTACATCTCACCTGACTAGGCTGTACAGTAGCTGGTCTCACCTGACCAGGCTGTACAGTAGCTGGTCTCACCTGGTTACATCTCACCTGACTAGGCTGTACAGTAGCTGGTCTCACCTGACTAGGCTGTACAGTAGCTGGTCTCACCTGGTTACAGCTCACCTGACTAGACTGTACAGTAACTGGACTCACCTGGTTACAT

Function

NR:

description
PREDICTED: involucrin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235916 True 300 lncRNA 0.50 1 96152525 96152824

Neighbor

gene id symbol gene type direction distance location
LOC110500533 LOC106561700 coding upstream 108955 96034220 ~ 96043570 (+)
LOC110500522 gpr22 coding upstream 141321 95993206 ~ 96011204 (+)
LOC118936882 NA coding upstream 264411 95885587 ~ 95888114 (+)
LOC110500485 hbp1 coding upstream 389382 95750879 ~ 95763143 (+)
LOC110500475 prkar2b coding upstream 405309 95731857 ~ 95747216 (+)
LOC110500557 LOC106561743 coding downstream 818567 96971391 ~ 97028188 (+)
LOC110500585 LOC106561739 coding downstream 929111 97081935 ~ 97085041 (+)
LOC110500594 LOC106561738 coding downstream 933105 97085929 ~ 97087755 (+)
LOC110500611 LOC106561734 coding downstream 1375883 97528707 ~ 97596323 (+)
LOC110533938 NA coding downstream 1452324 97605148 ~ 97606655 (+)
G208376 NA non-coding upstream 9902 96142424 ~ 96142623 (+)
G208374 NA non-coding upstream 11977 96139931 ~ 96140548 (+)
G208371 NA non-coding upstream 25673 96126230 ~ 96126852 (+)
G208369 NA non-coding upstream 26772 96125508 ~ 96125753 (+)
G208366 NA non-coding upstream 29251 96122892 ~ 96123274 (+)
G208380 NA non-coding downstream 2863 96155687 ~ 96155942 (+)
G208381 NA non-coding downstream 3576 96156400 ~ 96156635 (+)
G208384 NA non-coding downstream 21379 96174203 ~ 96174494 (+)
G208385 NA non-coding downstream 23771 96176595 ~ 96176831 (+)
G208396 NA non-coding downstream 59922 96212746 ~ 96212961 (+)
G206926 NA other upstream 1446277 94705946 ~ 94706248 (+)
G206908 NA other upstream 1520258 94631829 ~ 94632267 (+)
G206850 NA other upstream 1590301 94557169 ~ 94562224 (+)
LOC110500139 LOC106561672 other upstream 1714843 94391364 ~ 94437682 (+)
G206389 LOC106561642 other upstream 2050653 94100979 ~ 94101872 (+)
G208404 NA other downstream 74969 96227793 ~ 96228463 (+)
G208836 NA other downstream 459605 96612429 ~ 96613459 (+)
G209586 NA other downstream 1333652 97486476 ~ 97486772 (+)
G209591 NA other downstream 1465793 97618617 ~ 97619089 (+)
LOC110500822 LOC106561728 other downstream 1545287 97695939 ~ 97711108 (+)

Expression


Co-expression Network