Gene
RNA
| Item | Value |
|---|---|
| gene id | G208508 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 96205650 ~ 96205858 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: variable charge X-linked protein 3B-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU236058 | True | 209 | lncRNA | 0.44 | 1 | 96205650 | 96205858 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502500 | LOC106561698 | coding | downstream | 113245 | 96051302 ~ 96092405 (-) |
| LOC110533932 | NA | coding | downstream | 321971 | 95882131 ~ 95883679 (-) |
| LOC110500466 | nampt | coding | downstream | 484535 | 95703359 ~ 95721115 (-) |
| LOC110502485 | LOC106561707 | coding | downstream | 541147 | 95635896 ~ 95664503 (-) |
| parietopsin | LOC106561711 | coding | downstream | 573678 | 95628449 ~ 95632062 (-) |
| LOC110500576 | NA | coding | upstream | 427983 | 96633841 ~ 96640404 (-) |
| LOC110500541 | LOC106561741 | coding | upstream | 441272 | 96647130 ~ 96897073 (-) |
| pik3c2g | LOC106561742 | coding | upstream | 813733 | 97019591 ~ 97077900 (-) |
| LOC110502515 | reln | coding | upstream | 883349 | 97089207 ~ 97387953 (-) |
| LOC118937309 | NA | coding | upstream | 1288486 | 97494344 ~ 97496498 (-) |
| G208503 | NA | non-coding | downstream | 14276 | 96191154 ~ 96191374 (-) |
| G208496 | NA | non-coding | downstream | 27330 | 96178077 ~ 96178320 (-) |
| G208495 | NA | non-coding | downstream | 28292 | 96177068 ~ 96177358 (-) |
| G208494 | NA | non-coding | downstream | 29414 | 96176005 ~ 96176236 (-) |
| G208493 | NA | non-coding | downstream | 31217 | 96174206 ~ 96174433 (-) |
| G208511 | NA | non-coding | upstream | 2383 | 96208241 ~ 96208521 (-) |
| G208513 | NA | non-coding | upstream | 5314 | 96211172 ~ 96211637 (-) |
| G208521 | NA | non-coding | upstream | 16912 | 96222770 ~ 96223012 (-) |
| G208523 | NA | non-coding | upstream | 17856 | 96223714 ~ 96223942 (-) |
| G208525 | NA | non-coding | upstream | 20725 | 96226583 ~ 96226849 (-) |
| G208472 | NA | other | downstream | 71178 | 96134077 ~ 96134472 (-) |
| G208077 | NA | other | downstream | 373288 | 95829374 ~ 95832362 (-) |
| G207876 | LOC106561706 | other | downstream | 518786 | 95680851 ~ 95686864 (-) |
| G207884 | NA | other | downstream | 595864 | 95604228 ~ 95609786 (-) |
| G207959 | NA | other | downstream | 681423 | 95523968 ~ 95524227 (-) |
| G208658 | NA | other | upstream | 216008 | 96421866 ~ 96422224 (-) |
| G209560 | NA | other | upstream | 1210963 | 97416821 ~ 97417188 (-) |
| G209802 | NA | other | upstream | 1295314 | 97501172 ~ 97502394 (-) |
| G209841 | NA | other | upstream | 1413001 | 97618859 ~ 97619212 (-) |
| LOC118936884 | NA | other | upstream | 1938462 | 98127948 ~ 98145517 (-) |
