G208402


Basic Information

Item Value
gene id G208402
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 96222770 ~ 96223016 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU235942
aaaacgtaggctcagatggaccggcagattccgacaggacaggacaaggttgcagcaaacatgacgatagtctggttcaggcatgaataacacaaacaagaatccgacaaagacagaaacaaaaacagagagagatatagaggactaatcagagggaaaaagggaacaggtgggaaaaggggtgacgaggtagttaggaggagacaaggaacagctgggggaaagagggggagaaaaggtaacctaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235942 True 247 lncRNA 0.47 1 96222770 96223016

Neighbor

gene id symbol gene type direction distance location
LOC110500533 LOC106561700 coding upstream 179200 96034220 ~ 96043570 (+)
LOC110500522 gpr22 coding upstream 211566 95993206 ~ 96011204 (+)
LOC118936882 NA coding upstream 334656 95885587 ~ 95888114 (+)
LOC110500485 hbp1 coding upstream 459627 95750879 ~ 95763143 (+)
LOC110500475 prkar2b coding upstream 475554 95731857 ~ 95747216 (+)
LOC110500557 LOC106561743 coding downstream 748375 96971391 ~ 97028188 (+)
LOC110500585 LOC106561739 coding downstream 858919 97081935 ~ 97085041 (+)
LOC110500594 LOC106561738 coding downstream 862913 97085929 ~ 97087755 (+)
LOC110500611 LOC106561734 coding downstream 1305691 97528707 ~ 97596323 (+)
LOC110533938 NA coding downstream 1382132 97605148 ~ 97606655 (+)
G208400 NA non-coding upstream 4112 96218070 ~ 96218658 (+)
G208396 NA non-coding upstream 9809 96212746 ~ 96212961 (+)
G208385 NA non-coding upstream 45939 96176595 ~ 96176831 (+)
G208384 NA non-coding upstream 48276 96174203 ~ 96174494 (+)
G208381 NA non-coding upstream 66135 96156400 ~ 96156635 (+)
G208403 NA non-coding downstream 1781 96224797 ~ 96225025 (+)
G208408 NA non-coding downstream 12925 96235941 ~ 96236170 (+)
G208437 NA non-coding downstream 80904 96303920 ~ 96332790 (+)
G208455 NA non-coding downstream 127387 96350403 ~ 96350618 (+)
G208458 NA non-coding downstream 132009 96355025 ~ 96355232 (+)
G206926 NA other upstream 1516522 94705946 ~ 94706248 (+)
G206908 NA other upstream 1590503 94631829 ~ 94632267 (+)
G206850 NA other upstream 1660546 94557169 ~ 94562224 (+)
LOC110500139 LOC106561672 other upstream 1785088 94391364 ~ 94437682 (+)
G206389 LOC106561642 other upstream 2120898 94100979 ~ 94101872 (+)
G208404 NA other downstream 4777 96227793 ~ 96228463 (+)
G208836 NA other downstream 389413 96612429 ~ 96613459 (+)
G209586 NA other downstream 1263460 97486476 ~ 97486772 (+)
G209591 NA other downstream 1395601 97618617 ~ 97619089 (+)
LOC110500822 LOC106561728 other downstream 1475095 97695939 ~ 97711108 (+)

Expression


Co-expression Network