G208404


Basic Information

Item Value
gene id G208404
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 96227793 ~ 96228463 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU235944
ccagataacccctatacctatccaaataaccggtatgtctatccaaataacccctatacctatccaaataacccctatacctatccaaataacccctatacctatccaaataaccggtatgtctatccaaataacccatatacctatccaaataacccatatacctatccaaataacccatatacatatccaaataacccatatacctatccaaataacccatatatctatccaaataacccatatacctatccaaataacccatatacctatccaaataacccctatacctatccaaataaccggtatgtctatccaaataacccctatacctatccaaataacccatatacctatcGAAATAACCGGTAtgtctatccaaataacccatatacctatccaaataacccatatacctatccaaataaccggtatgtctatccaaataacccatatacctatccaaataaccggtatttctatccaaataacccatatatctatccaaataacccatatacctatccaaataacccatatatctatccaaataacccatatacctatccaaataacccctatacctatccaaataacccctatacctatccaaataacccctatacctatccaaataaccggtatgtctatccaaataacccctataccta

Function

NR:

description
PREDICTED: DNA-directed RNA polymerase II subunit RPB1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235944 True 671 TUCP 0.35 1 96227793 96228463

Neighbor

gene id symbol gene type direction distance location
LOC110500533 LOC106561700 coding upstream 184223 96034220 ~ 96043570 (+)
LOC110500522 gpr22 coding upstream 216589 95993206 ~ 96011204 (+)
LOC118936882 NA coding upstream 339679 95885587 ~ 95888114 (+)
LOC110500485 hbp1 coding upstream 464650 95750879 ~ 95763143 (+)
LOC110500475 prkar2b coding upstream 480577 95731857 ~ 95747216 (+)
LOC110500557 LOC106561743 coding downstream 742928 96971391 ~ 97028188 (+)
LOC110500585 LOC106561739 coding downstream 853472 97081935 ~ 97085041 (+)
LOC110500594 LOC106561738 coding downstream 857466 97085929 ~ 97087755 (+)
LOC110500611 LOC106561734 coding downstream 1300244 97528707 ~ 97596323 (+)
LOC110533938 NA coding downstream 1376685 97605148 ~ 97606655 (+)
G208403 NA non-coding upstream 2768 96224797 ~ 96225025 (+)
G208402 NA non-coding upstream 4777 96222770 ~ 96223016 (+)
G208400 NA non-coding upstream 9135 96218070 ~ 96218658 (+)
G208396 NA non-coding upstream 14832 96212746 ~ 96212961 (+)
G208385 NA non-coding upstream 50962 96176595 ~ 96176831 (+)
G208408 NA non-coding downstream 7478 96235941 ~ 96236170 (+)
G208437 NA non-coding downstream 75457 96303920 ~ 96332790 (+)
G208455 NA non-coding downstream 121940 96350403 ~ 96350618 (+)
G208458 NA non-coding downstream 126562 96355025 ~ 96355232 (+)
G208462 NA non-coding downstream 132332 96360795 ~ 96361929 (+)
G206926 NA other upstream 1521545 94705946 ~ 94706248 (+)
G206908 NA other upstream 1595526 94631829 ~ 94632267 (+)
G206850 NA other upstream 1665569 94557169 ~ 94562224 (+)
LOC110500139 LOC106561672 other upstream 1790111 94391364 ~ 94437682 (+)
G206389 LOC106561642 other upstream 2125921 94100979 ~ 94101872 (+)
G208836 NA other downstream 383966 96612429 ~ 96613459 (+)
G209586 NA other downstream 1258013 97486476 ~ 97486772 (+)
G209591 NA other downstream 1390154 97618617 ~ 97619089 (+)
LOC110500822 LOC106561728 other downstream 1469648 97695939 ~ 97711108 (+)
G209636 NA other downstream 1511598 97740061 ~ 97772765 (+)

Expression


Co-expression Network