G208437


Basic Information

Item Value
gene id G208437
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 96303920 ~ 96332790 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU235979
GAAGAGAGTGGGGCTTAcgttgcatccctgtctcaccccacggccctatAGAAAGAAGTGTttgtgttttttgcctatttcAACCGcagacttgttgtttgtgtacatggattttataatgttgtatttttttctcccaacaccactttccatcaatttgtatagcaaatcctcatgccaaattgagtctaagtattttttttaatcaacaaagcatgagaagactttgcctttgttttgttttgtttgtttgtcaattagggtatgTAGGGTGAACACATGGTCTGtcatatggtaatttggtaaaacggCAATTGTACATTTCCTCattaaaacaatgtactgagcaaatgtcaaagtCTGCTGTAAATGtgtcatgtactgtcatgttgtgtcttgtttctgtcctttcccttcaccctgtctccctctgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235979 True 434 lncRNA 0.38 2 96303920 96332790

Neighbor

gene id symbol gene type direction distance location
LOC110500533 LOC106561700 coding upstream 260350 96034220 ~ 96043570 (+)
LOC110500522 gpr22 coding upstream 292716 95993206 ~ 96011204 (+)
LOC118936882 NA coding upstream 415806 95885587 ~ 95888114 (+)
LOC110500485 hbp1 coding upstream 540777 95750879 ~ 95763143 (+)
LOC110500475 prkar2b coding upstream 556704 95731857 ~ 95747216 (+)
LOC110500557 LOC106561743 coding downstream 638601 96971391 ~ 97028188 (+)
LOC110500585 LOC106561739 coding downstream 749145 97081935 ~ 97085041 (+)
LOC110500594 LOC106561738 coding downstream 753139 97085929 ~ 97087755 (+)
LOC110500611 LOC106561734 coding downstream 1195917 97528707 ~ 97596323 (+)
LOC110533938 NA coding downstream 1272358 97605148 ~ 97606655 (+)
G208408 NA non-coding upstream 67750 96235941 ~ 96236170 (+)
G208403 NA non-coding upstream 78895 96224797 ~ 96225025 (+)
G208402 NA non-coding upstream 80904 96222770 ~ 96223016 (+)
G208400 NA non-coding upstream 85262 96218070 ~ 96218658 (+)
G208396 NA non-coding upstream 90959 96212746 ~ 96212961 (+)
G208455 NA non-coding downstream 17613 96350403 ~ 96350618 (+)
G208458 NA non-coding downstream 22235 96355025 ~ 96355232 (+)
G208462 NA non-coding downstream 28005 96360795 ~ 96361929 (+)
G208626 NA non-coding downstream 48898 96381688 ~ 96381941 (+)
G208632 NA non-coding downstream 58285 96391075 ~ 96391321 (+)
G208404 NA other upstream 75457 96227793 ~ 96228463 (+)
G206926 NA other upstream 1597672 94705946 ~ 94706248 (+)
G206908 NA other upstream 1671653 94631829 ~ 94632267 (+)
G206850 NA other upstream 1741696 94557169 ~ 94562224 (+)
LOC110500139 LOC106561672 other upstream 1866238 94391364 ~ 94437682 (+)
G208836 NA other downstream 279639 96612429 ~ 96613459 (+)
G209586 NA other downstream 1153686 97486476 ~ 97486772 (+)
G209591 NA other downstream 1285827 97618617 ~ 97619089 (+)
LOC110500822 LOC106561728 other downstream 1365321 97695939 ~ 97711108 (+)
G209636 NA other downstream 1407271 97740061 ~ 97772765 (+)

Expression


Co-expression Network