G208455


Basic Information

Item Value
gene id G208455
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 96350403 ~ 96350618 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU235999
CAAATGGCTATATAATATCGTCCAAAAATAATATTATGATTTGTTAACTGTATTGATTTTTTCCACTCTTATCATTAATATAGTCCTATTAATTATTATCACTCTAAGACTACAGGCCCAGATCATAATGACTTTTATTTTAATATGACGCCCACAGTGGTCGTTGGGGAGCGGGAGGAGGAATGACCTATAGCAGCGTTGGGAAttgttgggaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235999 True 216 lncRNA 0.35 1 96350403 96350618

Neighbor

gene id symbol gene type direction distance location
LOC110500533 LOC106561700 coding upstream 306833 96034220 ~ 96043570 (+)
LOC110500522 gpr22 coding upstream 339199 95993206 ~ 96011204 (+)
LOC118936882 NA coding upstream 462289 95885587 ~ 95888114 (+)
LOC110500485 hbp1 coding upstream 587260 95750879 ~ 95763143 (+)
LOC110500475 prkar2b coding upstream 603187 95731857 ~ 95747216 (+)
LOC110500557 LOC106561743 coding downstream 620773 96971391 ~ 97028188 (+)
LOC110500585 LOC106561739 coding downstream 731317 97081935 ~ 97085041 (+)
LOC110500594 LOC106561738 coding downstream 735311 97085929 ~ 97087755 (+)
LOC110500611 LOC106561734 coding downstream 1178089 97528707 ~ 97596323 (+)
LOC110533938 NA coding downstream 1254530 97605148 ~ 97606655 (+)
G208437 NA non-coding upstream 17613 96303920 ~ 96332790 (+)
G208408 NA non-coding upstream 114233 96235941 ~ 96236170 (+)
G208403 NA non-coding upstream 125378 96224797 ~ 96225025 (+)
G208402 NA non-coding upstream 127387 96222770 ~ 96223016 (+)
G208400 NA non-coding upstream 131745 96218070 ~ 96218658 (+)
G208458 NA non-coding downstream 4407 96355025 ~ 96355232 (+)
G208462 NA non-coding downstream 10177 96360795 ~ 96361929 (+)
G208626 NA non-coding downstream 31070 96381688 ~ 96381941 (+)
G208632 NA non-coding downstream 40457 96391075 ~ 96391321 (+)
G208649 NA non-coding downstream 55704 96406322 ~ 96406816 (+)
G208404 NA other upstream 121940 96227793 ~ 96228463 (+)
G206926 NA other upstream 1644155 94705946 ~ 94706248 (+)
G206908 NA other upstream 1718136 94631829 ~ 94632267 (+)
G206850 NA other upstream 1788179 94557169 ~ 94562224 (+)
LOC110500139 LOC106561672 other upstream 1912721 94391364 ~ 94437682 (+)
G208836 NA other downstream 261811 96612429 ~ 96613459 (+)
G209586 NA other downstream 1135858 97486476 ~ 97486772 (+)
G209591 NA other downstream 1267999 97618617 ~ 97619089 (+)
LOC110500822 LOC106561728 other downstream 1347493 97695939 ~ 97711108 (+)
G209636 NA other downstream 1389443 97740061 ~ 97772765 (+)

Expression


Co-expression Network