G208611



Basic Information


Item Value
gene id G208611
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 96364789 ~ 96365120 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU236169
CTacgaagagtgttggtggttctaaacttcttccagttaagaatgaaggaggccactgtgctcttggggaccttcaatgctgcagatctgTGTCACGACACAATcgtgtctctgagctctacgaacaattccttcgacctcatggcttggttattgctctgacatgctgtgggaccttatatagacaggtatgtgccttttcaaatcatgtccaatcaattgaatttaccaccggtggactccaatcaagttgtagacacatctcaaggatgataaatggaaacaggatgcacctgagctcaatttcgagtctcatagcaaagggtctgaat

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU236169 True 332 lncRNA 0.45 1 96364789 96365120

Neighbor


gene id symbol gene type direction distance location
LOC110502500 LOC106561698 coding downstream 272384 96051302 ~ 96092405 (-)
LOC110533932 NA coding downstream 481110 95882131 ~ 95883679 (-)
LOC110500466 nampt coding downstream 643674 95703359 ~ 95721115 (-)
LOC110502485 LOC106561707 coding downstream 700286 95635896 ~ 95664503 (-)
parietopsin LOC106561711 coding downstream 732817 95628449 ~ 95632062 (-)
LOC110500576 NA coding upstream 268721 96633841 ~ 96640404 (-)
LOC110500541 LOC106561741 coding upstream 282010 96647130 ~ 96897073 (-)
pik3c2g LOC106561742 coding upstream 654471 97019591 ~ 97077900 (-)
LOC110502515 reln coding upstream 724087 97089207 ~ 97387953 (-)
LOC118937309 NA coding upstream 1129224 97494344 ~ 97496498 (-)
G208610 NA non-coding downstream 140 96364397 ~ 96364649 (-)
G208607 NA non-coding downstream 5085 96359371 ~ 96359704 (-)
G208606 NA non-coding downstream 5661 96358519 ~ 96359128 (-)
G208603 NA non-coding downstream 8466 96356076 ~ 96356323 (-)
G208599 NA non-coding downstream 12547 96351644 ~ 96352242 (-)
G208629 NA non-coding upstream 22131 96387251 ~ 96387473 (-)
G208765 NA non-coding upstream 134697 96499817 ~ 96500344 (-)
G208769 NA non-coding upstream 139272 96504392 ~ 96504628 (-)
G208777 NA non-coding upstream 149446 96514566 ~ 96514766 (-)
G208781 NA non-coding upstream 153079 96518199 ~ 96518719 (-)
G208472 NA other downstream 230317 96134077 ~ 96134472 (-)
G208077 NA other downstream 532427 95829374 ~ 95832362 (-)
G207876 LOC106561706 other downstream 677925 95680851 ~ 95686864 (-)
G207884 NA other downstream 755003 95604228 ~ 95609786 (-)
G207959 NA other downstream 840562 95523968 ~ 95524227 (-)
G208658 NA other upstream 56746 96421866 ~ 96422224 (-)
G209560 NA other upstream 1051701 97416821 ~ 97417188 (-)
G209802 NA other upstream 1136052 97501172 ~ 97502394 (-)
G209841 NA other upstream 1253739 97618859 ~ 97619212 (-)
LOC118936884 NA other upstream 1779200 98127948 ~ 98145517 (-)

Expression



Co-expression Network