G208649


Basic Information

Item Value
gene id G208649
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 96406322 ~ 96406816 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU236210
ccgcctcccgttcttccttggggtggcgatattctcctggctgagcccaaggtcctttaccgtctaattcgtcctcccatgtccatacctcctcgcgctgctcctgctgctgctttctcctttgcccattaccacaccgcttggtcctgttgtggtgggtgattctgtaacgattctcctcttgtgaagtagaggcggaccaaagcgcagcgtggtggttgttcattgtatttattgacgacactatacatgaacaaactaacgaaaaaaaacaagaaacgtgagaactcaaaacagccctgtctggtgcaaacacaaaaacaggaacaatcacccacaaacacacagtgaaacccaggctacctaaatatggttcccaatcagagacaatgacgaacacctgcctctgattgagaaccatatcaggccgaacatagaactagaccaaaacatagaaaaacaaacatagactgcccacccaactcacgccctgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU236210 True 495 lncRNA 0.49 1 96406322 96406816

Neighbor

gene id symbol gene type direction distance location
LOC110500533 LOC106561700 coding upstream 362752 96034220 ~ 96043570 (+)
LOC110500522 gpr22 coding upstream 395118 95993206 ~ 96011204 (+)
LOC118936882 NA coding upstream 518208 95885587 ~ 95888114 (+)
LOC110500485 hbp1 coding upstream 643179 95750879 ~ 95763143 (+)
LOC110500475 prkar2b coding upstream 659106 95731857 ~ 95747216 (+)
LOC110500557 LOC106561743 coding downstream 564575 96971391 ~ 97028188 (+)
LOC110500585 LOC106561739 coding downstream 675119 97081935 ~ 97085041 (+)
LOC110500594 LOC106561738 coding downstream 679113 97085929 ~ 97087755 (+)
LOC110500611 LOC106561734 coding downstream 1121891 97528707 ~ 97596323 (+)
LOC110533938 NA coding downstream 1198332 97605148 ~ 97606655 (+)
G208632 NA non-coding upstream 15001 96391075 ~ 96391321 (+)
G208626 NA non-coding upstream 24381 96381688 ~ 96381941 (+)
G208462 NA non-coding upstream 44393 96360795 ~ 96361929 (+)
G208458 NA non-coding upstream 51090 96355025 ~ 96355232 (+)
G208455 NA non-coding upstream 55704 96350403 ~ 96350618 (+)
G208657 NA non-coding downstream 14108 96420924 ~ 96421196 (+)
G208663 NA non-coding downstream 19618 96426434 ~ 96426758 (+)
G208715 NA non-coding downstream 97276 96504092 ~ 96504382 (+)
G208718 NA non-coding downstream 102692 96509508 ~ 96509708 (+)
G208719 NA non-coding downstream 103898 96510714 ~ 96510962 (+)
G208404 NA other upstream 177859 96227793 ~ 96228463 (+)
G206926 NA other upstream 1700074 94705946 ~ 94706248 (+)
G206908 NA other upstream 1774055 94631829 ~ 94632267 (+)
G206850 NA other upstream 1844098 94557169 ~ 94562224 (+)
LOC110500139 LOC106561672 other upstream 1968640 94391364 ~ 94437682 (+)
G208836 NA other downstream 205613 96612429 ~ 96613459 (+)
G209586 NA other downstream 1079660 97486476 ~ 97486772 (+)
G209591 NA other downstream 1211801 97618617 ~ 97619089 (+)
LOC110500822 LOC106561728 other downstream 1291295 97695939 ~ 97711108 (+)
G209636 NA other downstream 1333245 97740061 ~ 97772765 (+)

Expression


Co-expression Network