G208715


Basic Information

Item Value
gene id G208715
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 96504092 ~ 96504382 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU236280
ggtttatgaactcctGCCTGTACCCGACCTGCCTTTTtctataataaatatcagagctcaaccatctgcctcctgtgtctgcatttgggtctcaccttgtgcccttatatttctttatagttgtctaatgttgttTTAATGTTAATCCTGAATCACTGTGATAAATATGATTGATTTTCTTGAGTGTATTATACAGTAcaaagctgagatttactttgaagtccaaagtgtaggaatacaggtgaaatcagtcattgacacagacatggtggcgtAGCAGGAAGATCGGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU236280 True 291 lncRNA 0.38 1 96504092 96504382

Neighbor

gene id symbol gene type direction distance location
LOC110500533 LOC106561700 coding upstream 460522 96034220 ~ 96043570 (+)
LOC110500522 gpr22 coding upstream 492888 95993206 ~ 96011204 (+)
LOC118936882 NA coding upstream 615978 95885587 ~ 95888114 (+)
LOC110500485 hbp1 coding upstream 740949 95750879 ~ 95763143 (+)
LOC110500475 prkar2b coding upstream 756876 95731857 ~ 95747216 (+)
LOC110500557 LOC106561743 coding downstream 467009 96971391 ~ 97028188 (+)
LOC110500585 LOC106561739 coding downstream 577553 97081935 ~ 97085041 (+)
LOC110500594 LOC106561738 coding downstream 581547 97085929 ~ 97087755 (+)
LOC110500611 LOC106561734 coding downstream 1024325 97528707 ~ 97596323 (+)
LOC110533938 NA coding downstream 1100766 97605148 ~ 97606655 (+)
G208663 NA non-coding upstream 77334 96426434 ~ 96426758 (+)
G208657 NA non-coding upstream 82896 96420924 ~ 96421196 (+)
G208649 NA non-coding upstream 97276 96406322 ~ 96406816 (+)
G208632 NA non-coding upstream 112771 96391075 ~ 96391321 (+)
G208626 NA non-coding upstream 122151 96381688 ~ 96381941 (+)
G208718 NA non-coding downstream 5126 96509508 ~ 96509708 (+)
G208719 NA non-coding downstream 6332 96510714 ~ 96510962 (+)
G208721 NA non-coding downstream 9012 96513394 ~ 96513634 (+)
G208723 NA non-coding downstream 10184 96514566 ~ 96514771 (+)
G208726 NA non-coding downstream 16243 96520625 ~ 96520875 (+)
G208404 NA other upstream 275629 96227793 ~ 96228463 (+)
G206926 NA other upstream 1797844 94705946 ~ 94706248 (+)
G206908 NA other upstream 1871825 94631829 ~ 94632267 (+)
G206850 NA other upstream 1941868 94557169 ~ 94562224 (+)
LOC110500139 LOC106561672 other upstream 2066410 94391364 ~ 94437682 (+)
G208836 NA other downstream 108047 96612429 ~ 96613459 (+)
G209586 NA other downstream 982094 97486476 ~ 97486772 (+)
G209591 NA other downstream 1114235 97618617 ~ 97619089 (+)
LOC110500822 LOC106561728 other downstream 1193729 97695939 ~ 97711108 (+)
G209636 NA other downstream 1235679 97740061 ~ 97772765 (+)

Expression


Co-expression Network