G208819


Basic Information

Item Value
gene id G208819
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 96567864 ~ 96568814 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU236398
caggaactaatggggatccataataaaccccaggaagagtagctgctgtcttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgtcttggcaggaactaatggggatccataataaacaccaggaagagtagctgctgtcttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgtcttggcaggaactaatggggatccataataaacaccaggaagagtagctgctgtcttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgtcttggcaggaactaatggggatccataataaacaccaggaagagtagctgctgtcttggcaggaactaatggggatccataataaaccccaggaagagtagttgctgtcttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgtcttggcaggaactaatggggatccataataaacaccaggaagagtagctgctgtcttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgtcttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgtcttggcaggaactaatggggatccataacaaaccccaggaagagtagctgctgccttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgtcttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgtcttggcaggaactaatggggatccataataaacaccaggaagagtagctgctgccttggcaggaactaatggggatccataataaacaccaggaagagtagctgctgtcttggcaggaactaatggggatccataataaacaccag

Function

NR:

description
PREDICTED: uncharacterized protein LOC106580993

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU236398 True 951 lncRNA 0.48 1 96567864 96568814

Neighbor

gene id symbol gene type direction distance location
LOC110500533 LOC106561700 coding upstream 524294 96034220 ~ 96043570 (+)
LOC110500522 gpr22 coding upstream 556660 95993206 ~ 96011204 (+)
LOC118936882 NA coding upstream 679750 95885587 ~ 95888114 (+)
LOC110500485 hbp1 coding upstream 804721 95750879 ~ 95763143 (+)
LOC110500475 prkar2b coding upstream 820648 95731857 ~ 95747216 (+)
LOC110500557 LOC106561743 coding downstream 402577 96971391 ~ 97028188 (+)
LOC110500585 LOC106561739 coding downstream 513121 97081935 ~ 97085041 (+)
LOC110500594 LOC106561738 coding downstream 517115 97085929 ~ 97087755 (+)
LOC110500611 LOC106561734 coding downstream 959893 97528707 ~ 97596323 (+)
LOC110533938 NA coding downstream 1036334 97605148 ~ 97606655 (+)
G208811 NA non-coding upstream 14702 96552959 ~ 96553162 (+)
G208809 NA non-coding upstream 15272 96552322 ~ 96552592 (+)
G208789 NA non-coding upstream 36315 96531250 ~ 96531549 (+)
G208726 NA non-coding upstream 46989 96520625 ~ 96520875 (+)
G208723 NA non-coding upstream 53093 96514566 ~ 96514771 (+)
G208829 NA non-coding downstream 17021 96585835 ~ 96594493 (+)
G208833 NA non-coding downstream 26843 96595657 ~ 96596455 (+)
G208834 NA non-coding downstream 37687 96606501 ~ 96606731 (+)
G208839 NA non-coding downstream 57338 96626152 ~ 96626359 (+)
G208840 NA non-coding downstream 58217 96627031 ~ 96627261 (+)
G208404 NA other upstream 339401 96227793 ~ 96228463 (+)
G206926 NA other upstream 1861616 94705946 ~ 94706248 (+)
G206908 NA other upstream 1935597 94631829 ~ 94632267 (+)
G206850 NA other upstream 2005640 94557169 ~ 94562224 (+)
LOC110500139 LOC106561672 other upstream 2130182 94391364 ~ 94437682 (+)
G208836 NA other downstream 43615 96612429 ~ 96613459 (+)
G209586 NA other downstream 917662 97486476 ~ 97486772 (+)
G209591 NA other downstream 1049803 97618617 ~ 97619089 (+)
LOC110500822 LOC106561728 other downstream 1129297 97695939 ~ 97711108 (+)
G209636 NA other downstream 1171247 97740061 ~ 97772765 (+)

Expression


Co-expression Network