G208840


Basic Information

Item Value
gene id G208840
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 96627031 ~ 96627261 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU236419
TCCACTTTTTATCcgtggattaattgttggagtagagaaCTCAACGTGGGTCAAACTTCTACAAAGATCCAGAAAAAAACGACCATacgcatttcaggtaaaataacaatccGATGTTTATTTCCCAGGATAAATTAACTAGCAACAGCcagctaaatgtccatgaatgtttcatgtgtgtttccacctttccccaaattaatatagctGGTTCATAGTTAGTTTTGGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU236419 True 231 lncRNA 0.36 1 96627031 96627261

Neighbor

gene id symbol gene type direction distance location
LOC110500533 LOC106561700 coding upstream 583461 96034220 ~ 96043570 (+)
LOC110500522 gpr22 coding upstream 615827 95993206 ~ 96011204 (+)
LOC118936882 NA coding upstream 738917 95885587 ~ 95888114 (+)
LOC110500485 hbp1 coding upstream 863888 95750879 ~ 95763143 (+)
LOC110500475 prkar2b coding upstream 879815 95731857 ~ 95747216 (+)
LOC110500557 LOC106561743 coding downstream 344130 96971391 ~ 97028188 (+)
LOC110500585 LOC106561739 coding downstream 454674 97081935 ~ 97085041 (+)
LOC110500594 LOC106561738 coding downstream 458668 97085929 ~ 97087755 (+)
LOC110500611 LOC106561734 coding downstream 901446 97528707 ~ 97596323 (+)
LOC110533938 NA coding downstream 977887 97605148 ~ 97606655 (+)
G208839 NA non-coding upstream 672 96626152 ~ 96626359 (+)
G208834 NA non-coding upstream 20300 96606501 ~ 96606731 (+)
G208833 NA non-coding upstream 30576 96595657 ~ 96596455 (+)
G208829 NA non-coding upstream 32538 96585835 ~ 96594493 (+)
G208819 NA non-coding upstream 58217 96567864 ~ 96568814 (+)
G208847 NA non-coding downstream 15722 96642983 ~ 96646034 (+)
G208855 NA non-coding downstream 32869 96660130 ~ 96667917 (+)
G208898 NA non-coding downstream 115000 96742261 ~ 96742769 (+)
G208912 NA non-coding downstream 145949 96773210 ~ 96774003 (+)
G208975 NA non-coding downstream 250269 96877530 ~ 96878953 (+)
G208836 NA other upstream 13572 96612429 ~ 96613459 (+)
G208404 NA other upstream 398568 96227793 ~ 96228463 (+)
G206926 NA other upstream 1920783 94705946 ~ 94706248 (+)
G206908 NA other upstream 1994764 94631829 ~ 94632267 (+)
G206850 NA other upstream 2064807 94557169 ~ 94562224 (+)
G209586 NA other downstream 859215 97486476 ~ 97486772 (+)
G209591 NA other downstream 991356 97618617 ~ 97619089 (+)
LOC110500822 LOC106561728 other downstream 1070850 97695939 ~ 97711108 (+)
G209636 NA other downstream 1112800 97740061 ~ 97772765 (+)
G209759 NA other downstream 1329983 97957244 ~ 97958896 (+)

Expression


Co-expression Network