G209042


Basic Information

Item Value
gene id G209042
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 97028587 ~ 97029023 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU236675
agaacccttttgggttccacgtAGACGGACAACCGATCTTCTACCCACCAGACCAAAAACCCATCTCCTACCCACTGGACAGACAACCCATTGCCTACCCACCGGACAGACAACCCATCTCCTACCCACCAGACAGACAACCCATCTCCTACCCACCAGACAGACAACCCATCTCCTACCCACCAGACAGACAACCCATCTCCTACCCAccagacagacaacacatttcCTACCCACCAGACAGACAACCCATCGCCTACCCACTGGACAGACAACCCATCTCCTACCCACCAGACAGACAACCCATCTCCTACCCACCAGACAGACAACCCATTGCCTACCCACCAGACAGACAACCCATTGCCTACccaccagacagagag

Function

NR:

description
putative protein in rps4-rps11 intergenic region

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU236675 True 383 lncRNA 0.48 2 97028587 97029023

Neighbor

gene id symbol gene type direction distance location
LOC110500557 LOC106561743 coding upstream 399 96971391 ~ 97028188 (+)
LOC110500533 LOC106561700 coding upstream 985017 96034220 ~ 96043570 (+)
LOC110500522 gpr22 coding upstream 1017383 95993206 ~ 96011204 (+)
LOC118936882 NA coding upstream 1140473 95885587 ~ 95888114 (+)
LOC110500485 hbp1 coding upstream 1265444 95750879 ~ 95763143 (+)
LOC110500585 LOC106561739 coding downstream 52912 97081935 ~ 97085041 (+)
LOC110500594 LOC106561738 coding downstream 56906 97085929 ~ 97087755 (+)
LOC110500611 LOC106561734 coding downstream 499684 97528707 ~ 97596323 (+)
LOC110533938 NA coding downstream 576125 97605148 ~ 97606655 (+)
LOC118944222 NA coding downstream 591534 97620557 ~ 97620665 (+)
G209036 NA non-coding upstream 4284 97019672 ~ 97024303 (+)
G208975 NA non-coding upstream 149634 96877530 ~ 96878953 (+)
G208912 NA non-coding upstream 254584 96773210 ~ 96774003 (+)
G208898 NA non-coding upstream 285818 96742261 ~ 96742769 (+)
G208855 NA non-coding upstream 360670 96660130 ~ 96667917 (+)
G209046 NA non-coding downstream 8367 97037390 ~ 97039274 (+)
G209052 NA non-coding downstream 14952 97043975 ~ 97044402 (+)
G209053 NA non-coding downstream 16155 97045178 ~ 97046133 (+)
G209037 NA non-coding downstream 26327 97055350 ~ 97064668 (+)
G209072 NA non-coding downstream 58873 97087896 ~ 97091817 (+)
G208836 NA other upstream 415128 96612429 ~ 96613459 (+)
G208404 NA other upstream 800124 96227793 ~ 96228463 (+)
G206926 NA other upstream 2322339 94705946 ~ 94706248 (+)
G206908 NA other upstream 2396320 94631829 ~ 94632267 (+)
G206850 NA other upstream 2466363 94557169 ~ 94562224 (+)
G209586 NA other downstream 457453 97486476 ~ 97486772 (+)
G209591 NA other downstream 589594 97618617 ~ 97619089 (+)
LOC110500822 LOC106561728 other downstream 669088 97695939 ~ 97711108 (+)
G209636 NA other downstream 711038 97740061 ~ 97772765 (+)
G209759 NA other downstream 928221 97957244 ~ 97958896 (+)

Expression


Co-expression Network