G209543


Basic Information

Item Value
gene id G209543
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 97393748 ~ 97393960 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU237242
tatttggcctgaatgcaaaggaCAATCTCTGGAGAAAACCAGGAATagctcatcacccgtctaacaaAAACCCTaacgtgaagcatggtggtggcagcttcatgccatagggatgcttttctgcatcatgcactgggagactggtaaggatagaggtaCCAATGAATGGGGCCAAATataggcaaatccttgatgagaacctgcttcagagag

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU237242 True 213 lncRNA 0.46 1 97393748 97393960

Neighbor

gene id symbol gene type direction distance location
LOC110500594 LOC106561738 coding upstream 305993 97085929 ~ 97087755 (+)
LOC110500585 LOC106561739 coding upstream 308707 97081935 ~ 97085041 (+)
LOC110500557 LOC106561743 coding upstream 365560 96971391 ~ 97028188 (+)
LOC110500533 LOC106561700 coding upstream 1350178 96034220 ~ 96043570 (+)
LOC110500522 gpr22 coding upstream 1382544 95993206 ~ 96011204 (+)
LOC110500611 LOC106561734 coding downstream 134747 97528707 ~ 97596323 (+)
LOC110533938 NA coding downstream 211188 97605148 ~ 97606655 (+)
LOC118944222 NA coding downstream 226597 97620557 ~ 97620665 (+)
LOC118944205 NA coding downstream 234317 97628277 ~ 97628490 (+)
LOC110512361 LOC106561728 coding downstream 239681 97633641 ~ 97676623 (+)
G209534 NA non-coding upstream 5307 97388169 ~ 97388441 (+)
G209220 NA non-coding upstream 5744 97387524 ~ 97388004 (+)
G209160 NA non-coding upstream 128426 97263831 ~ 97265322 (+)
G209088 NA non-coding upstream 284694 97108652 ~ 97109054 (+)
G209072 NA non-coding upstream 301931 97087896 ~ 97091817 (+)
G209577 NA non-coding downstream 76767 97470727 ~ 97471288 (+)
G209578 NA non-coding downstream 78563 97472523 ~ 97472827 (+)
G209590 NA non-coding downstream 96197 97490157 ~ 97599263 (+)
G209611 NA non-coding downstream 143629 97537589 ~ 97538681 (+)
G209617 NA non-coding downstream 166152 97560112 ~ 97560956 (+)
G208836 NA other upstream 780289 96612429 ~ 96613459 (+)
G208404 NA other upstream 1165285 96227793 ~ 96228463 (+)
G206926 NA other upstream 2687500 94705946 ~ 94706248 (+)
G206908 NA other upstream 2761481 94631829 ~ 94632267 (+)
G206850 NA other upstream 2831524 94557169 ~ 94562224 (+)
G209586 NA other downstream 92516 97486476 ~ 97486772 (+)
G209591 NA other downstream 224657 97618617 ~ 97619089 (+)
LOC110500822 LOC106561728 other downstream 304151 97695939 ~ 97711108 (+)
G209636 NA other downstream 346101 97740061 ~ 97772765 (+)
G209759 NA other downstream 563284 97957244 ~ 97958896 (+)

Expression


Co-expression Network