G209548



Basic Information


Item Value
gene id G209548
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 97395763 ~ 97400002 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU237255
accgtgaagaggggatactatatagtgttgttgggtctgtaaatgtgaagaggggatactatatagtgttgttgggtctgtaaccgtcaagaggggatactatatagtgttgttgggtctgtaatcgtgaagaggggatactatatagtgttgttgggtctgtaaccgtGAAgtggggatactatatagtgttgttgggtctgtaaccgtggagaggggatactatatagtgttgttgggtctgtaaccgtgaagaggggatactatatagtgttgttgggtctgtaaccgtgaagaggggatactatatagtgttgttgggtctgtaaccgtgaagaggggatactatatagtgttgttgggtctgtaaccgtgaagaggggatactatatagtgttgttgggtctttACCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU237255 True 413 lncRNA 0.44 2 97395763 97400002

Neighbor


gene id symbol gene type direction distance location
LOC110502515 reln coding downstream 7810 97089207 ~ 97387953 (-)
pik3c2g LOC106561742 coding downstream 317863 97019591 ~ 97077900 (-)
LOC110500541 LOC106561741 coding downstream 498690 96647130 ~ 96897073 (-)
LOC110500576 NA coding downstream 755359 96633841 ~ 96640404 (-)
LOC110502509 LOC106561697 coding downstream 1025557 96129727 ~ 96370206 (-)
LOC118937309 NA coding upstream 94342 97494344 ~ 97496498 (-)
LOC118944190 NA coding upstream 222004 97621775 ~ 97675000 (-)
LOC118944213 NA coding upstream 225779 97625781 ~ 97625897 (-)
LOC118944196 NA coding upstream 247859 97647861 ~ 97648048 (-)
LOC118943865 LOC106593246 coding upstream 252204 97626323 ~ 97690421 (-)
G209535 NA non-coding downstream 7303 97388139 ~ 97388460 (-)
G209486 NA non-coding downstream 105243 97288851 ~ 97290520 (-)
G209478 NA non-coding downstream 130158 97261694 ~ 97265605 (-)
G209474 NA non-coding downstream 147168 97245477 ~ 97248595 (-)
G209559 NA non-coding upstream 14614 97414616 ~ 97414915 (-)
G209563 NA non-coding upstream 23034 97423036 ~ 97423313 (-)
G209565 NA non-coding upstream 23746 97423748 ~ 97424347 (-)
G209567 NA non-coding upstream 31629 97431631 ~ 97431884 (-)
G209576 NA non-coding upstream 70266 97470268 ~ 97470726 (-)
G208658 NA other downstream 973539 96421866 ~ 96422224 (-)
G208472 NA other downstream 1261291 96134077 ~ 96134472 (-)
G208077 NA other downstream 1563401 95829374 ~ 95832362 (-)
G207876 LOC106561706 other downstream 1708899 95680851 ~ 95686864 (-)
G207884 NA other downstream 1785977 95604228 ~ 95609786 (-)
G209560 NA other upstream 16819 97416821 ~ 97417188 (-)
G209802 NA other upstream 101170 97501172 ~ 97502394 (-)
G209841 NA other upstream 218857 97618859 ~ 97619212 (-)
LOC118936884 NA other upstream 744318 98127948 ~ 98145517 (-)
LOC118943885 LOC106561728 other upstream 1518446 98914015 ~ 98946069 (-)

Expression



Co-expression Network