G209875


Basic Information

Item Value
gene id G209875
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 97609516 ~ 97612103 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU237711
cgtaggacctacataatgttatcaggtatatGCTGAATGTCCCCCCCCCCGTAGGACCTacataatgttatcaggtatatgctgaatgtcccccccccccccgtaggacctacataatgttatcaggtatatgctgaatgtcccccccccccgtaGGACCcacataatgttatcaggtataaTCAACACAGTCACAATACCAGAGCTAGTGTTATGTCTTGTAAAACCCAGAGAGTAAATAGTACTGTGAGGAGCACGTTTTTCCATACAGGCATTTGTCTATGGAATAGCCTTCCGTTGAAGATCAAGCAagcaaaaaaatagttttaaaaatcaGCCAAAGGTTTTCATTTGTACAAGGTTGTCTAAGTCAGAGAAACCACCCCACTGCCCCTTGTGCCCCTACTGCTGGTGAGGTGTATTTATTTGAAGGATCGGTATGATGTGCAATTAATAAATTGTTTTAATGTGAAATGAATATGGttgatttttaaggttagggattaagtGCTGTGAATAGAGCCACTTTTTAGGATGCCAATATAAATGAATGTATTGATGGTTGTTTGTAATTTTGTCTTTTAATCATTATATGTGTTATTGTTATTACAATATTGTTATTACCATCGAGAACCACCATGGAAACAAACATTTTAATGAATACTTTCAAGTGATATCCTCTACGTCCACATTGTACATTTTCTTGTATATGTCTGTTACCTAAAATAAATTCAATTCaacccctcccgcatctgaactggctacatAGAGGGCAAGGCATGATCAGAGGTGAGCGGTCATTtgtaaagagatgctttacattgaaatacagatagagatgcagtagtcccagagttaatgatccaaggtcagttttgcatttcaccttcTGATTATTATGATGACTAACAAtgttagaataaaaaataaaaacaaggtttaaacatgctctctctctctttctccctccatctgtctcgtctgcaggtatgttttgatgtgagagaggatgccaaaCCCCAGTCccatcatcgccacctcacccgctcttaagataacctttgGGCCGACTGggagcccaaggctggttaggagacaccactagagacagACATTATTATGTAATTGTTGGGAACtaagagaatattagggtagcactgtggttcattaatcatatgctgtcttccctgctcctctgttcttacctctttccctttctgtcttttacacctctccctcccatcctctgttcttacctctctccctcccctctttcttcctctgttcttacctctttccctttctgtcttttacacctctccctcccatcctctgttcttacctctctccccacctcctctttcttcctctgtttttgttaatgcacaccagatgtgcattgaagtacagattgaacttgtttATAATATAAAATtacaattataatatttatagtgcatgtattatgtattgttAACACTTGGATTAttaacttctttcaataaagtgtttcacattctctactggttgaaattaagtctaTCGTTTGATGAAATACTACACCTATCCTGTGTTTATCTGTCAGAGTCTATCTAGAAAATAGCGAAGGAGTCAGACGCACAAACATAAATGGAAActagagggttaaataaggaacataattatgagatgggaaccaggtgtataaacagacaaaacaaaaggaaaaattaaacatggatcggtggcagcaagaaagccggtgacgttgaccaccgaacgccgcccgaacaaggagggaACAACTTTGGTGGAAGTCTTGACAGTACCCCTCCCTTGACGTGCGGCTCCAGCAgtgcgccgacaccggcctctgGGATGACCCGGGGGACGAgacgcagggcgatccggatggagtcGGTGAAATTCCTGGAGTAACAATGGGTCCAGGATGTCCCCCACTggtacccagcatctctcctctgggCCGTACCCGTCCCACTTCACGAGGTACTCTCGCCCGACGTCTTGAGTCcatgccggggccccctcgatatCCAGAAGGGGTGGAgtaacctcccgcacctcagactgctggagcggaccagccaccacc

Function

NR:

description
PREDICTED: chromo domain-containing protein cec-1-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU237711 True 2095 lncRNA 0.49 5 97609516 97612103

Neighbor

gene id symbol gene type direction distance location
LOC118937309 NA coding downstream 113018 97494344 ~ 97496498 (-)
LOC110502515 reln coding downstream 221563 97089207 ~ 97387953 (-)
pik3c2g LOC106561742 coding downstream 531616 97019591 ~ 97077900 (-)
LOC110500541 LOC106561741 coding downstream 712443 96647130 ~ 96897073 (-)
LOC110500576 NA coding downstream 969112 96633841 ~ 96640404 (-)
LOC118944190 NA coding upstream 9903 97621775 ~ 97675000 (-)
LOC118944213 NA coding upstream 13678 97625781 ~ 97625897 (-)
LOC118944196 NA coding upstream 35758 97647861 ~ 97648048 (-)
LOC118943865 LOC106593246 coding upstream 40103 97626323 ~ 97690421 (-)
LOC118943862 NA coding upstream 43048 97655151 ~ 97660464 (-)
G209883 NA non-coding downstream 5139 97604157 ~ 97604377 (-)
G209881 NA non-coding downstream 9919 97599359 ~ 97599597 (-)
G209874 NA non-coding downstream 10383 97595728 ~ 97599133 (-)
G209799 NA non-coding downstream 45593 97491227 ~ 97563923 (-)
G209858 NA non-coding upstream 5563 97617666 ~ 97618024 (-)
G209866 NA non-coding upstream 7692 97619795 ~ 97646274 (-)
G209885 NA non-coding upstream 20698 97632801 ~ 97669516 (-)
G209802 NA other downstream 107122 97501172 ~ 97502394 (-)
G209560 NA other downstream 192328 97416821 ~ 97417188 (-)
G208658 NA other downstream 1187292 96421866 ~ 96422224 (-)
G208472 NA other downstream 1475044 96134077 ~ 96134472 (-)
G208077 NA other downstream 1777154 95829374 ~ 95832362 (-)
G209841 NA other upstream 6756 97618859 ~ 97619212 (-)
LOC118936884 NA other upstream 532217 98127948 ~ 98145517 (-)
LOC118943885 LOC106561728 other upstream 1306345 98914015 ~ 98946069 (-)
LOC118943882 LOC106561728 other upstream 1330371 98936783 ~ 98944041 (-)
G210765 NA other upstream 1413629 99025732 ~ 99026118 (-)

Expression


Co-expression Network