G209651


Basic Information

Item Value
gene id G209651
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 97637708 ~ 97708658 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU237411
gtggaggctatatacagggtattacggtacagagtcaatgtggaggctatatacagggtattacggtacagagtcaatgtgtaggctatatacagggtattacggtacagagtcaatgtggaggttatatacaggtggtaccggtacagagccaatgtggaggctatatacagggtgttacggtacagagtcaatgtggaggctatatacaaggtattacggtacagagtcaatgtggaggttatatacagggtattacggtacagagtcaatgtggaggctatatacagggtattacggtacagagtcaatgtggaggctatatacagggtattacggtacagagtcaatgtggaggctatatacaggg
>TU237408
caatgtggaggctatatacagtggtaccggtacagagccaatgtggaggctatatacagggtgttacggtacagagtcaatgtggaggctatatacaaggtattacggtacagagtcaatgtggaggctatatacagggtattacggtacagagtcaatgtgcaggggcaccagtgtcgaggtaattgaggtaatatatggGAAGGCTCTTTCAGCGTGaatacccccgtgcacaaagcgaggtccatgcagaaatggttagTCGATCAGTGTGTTTAGAACTTGACTGCACAGAGacttgacctcaatcccatcgaaagcctttgggatgaattggaatgctgactgcgggcctaatcgcccaacatcagtgcctgacctcactaatgctcttgtggctgaatggaatcaagtccccctgcagcaatgttccaacatctagtggaaagccttcccagaagagtggaggctgttatagcagcaatgttccaacatctagtggaaagccttcccagaagagtggaggctgttatatcagcaaaggggggaccaactgcatattaaatgcccatgattttagaatgagatgttcgacaagcaggtgtccacatacactacattaccaaaagtatgttgaATGACAAATATTTAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU237411 False 370 lncRNA 0.44 2 97637708 97673263
TU237408 True 653 lncRNA 0.46 2 97673008 97708658

Neighbor

gene id symbol gene type direction distance location
LOC118944205 NA coding upstream 9218 97628277 ~ 97628490 (+)
LOC118944222 NA coding upstream 17043 97620557 ~ 97620665 (+)
LOC110533938 NA coding upstream 31053 97605148 ~ 97606655 (+)
LOC110500611 LOC106561734 coding upstream 41385 97528707 ~ 97596323 (+)
LOC110500594 LOC106561738 coding upstream 549953 97085929 ~ 97087755 (+)
LOC118944224 NA coding downstream 7627 97716285 ~ 97716393 (+)
LOC118944202 NA coding downstream 13597 97722255 ~ 97722468 (+)
LOC110512528 LOC106561728 coding downstream 23537 97732195 ~ 97746816 (+)
LOC118944218 NA coding downstream 45516 97754174 ~ 97754272 (+)
LOC118944204 NA coding downstream 51487 97759785 ~ 97761071 (+)
G209591 NA non-coding upstream 18619 97618617 ~ 97619089 (+)
G209644 NA non-coding upstream 45453 97591424 ~ 97592255 (+)
G209619 NA non-coding upstream 71443 97562329 ~ 97566265 (+)
G209617 NA non-coding upstream 76752 97560112 ~ 97560956 (+)
G209629 NA non-coding downstream 726 97709384 ~ 97745608 (+)
G209667 NA non-coding downstream 6450 97715108 ~ 97753268 (+)
G209668 NA non-coding downstream 8142 97716800 ~ 97755407 (+)
G209670 NA non-coding downstream 16353 97725011 ~ 97763227 (+)
G209586 NA other upstream 150936 97486476 ~ 97486772 (+)
G208836 NA other upstream 1024249 96612429 ~ 96613459 (+)
G208404 NA other upstream 1409245 96227793 ~ 96228463 (+)
G206926 NA other upstream 2931460 94705946 ~ 94706248 (+)
G209636 NA other downstream 31403 97740061 ~ 97772765 (+)
G209759 NA other downstream 248586 97957244 ~ 97958896 (+)
G210408 NA other downstream 988510 98697168 ~ 98700392 (+)
LOC110510476 LOC106561728 other downstream 1188866 98897524 ~ 98944948 (+)
G210484 NA other downstream 1194130 98902788 ~ 98926406 (+)

Expression


Co-expression Network