G209850


Basic Information

Item Value
gene id G209850
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 97639887 ~ 97676568 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU237665
TTTAATATTGTTTATATTTCCATTACCAATCCTGAAAATGTGCTGTGAAAAAGAAAAACAAGTGATAATAACCCAGTACAACCTTCTTTCCTAAATACATTTGGTCTGTTTCTCACCTCACTTGATACAAGCCGTGCAAAGTTATGCCAAGGAGACCTAGAGTGATTGTTGCTTCAACTCAGTGGAAGCGATTATACTGGGTTTCTCAGTGTAGCAGTGCtgctctaggatcagtttagtctTTTtctgatcataatgaataagaaggGGGGGGGCcatctgattctagatcagcgtATCTACTCAGACGTTTTGTGAACATAGGCCCAGGATGAAATGGTCAGCGCCGTGTTTACTACTTGACCCTACGGCTATTTATTGAAATGCAAAATGtaaaatacaaaatgtattttccttcGTCAAACAGTAACAATTAAATTTTGTTTGACAGATCATTTATTTTAAAAGATCTAATTAAATTCATTCTAGGATtgggaaaaaaaacaagtttGATGCTGGGTTTTCGCATCTCATTATGGGAGGTGAAACATTTTGGTATCCAGAACACAGTCTTATTGGTCAGTCAGTTTCGAGGAATCGTTGAAGGAATTTCTAACGAGGAGAAACAACCCTGCTGAAATCAGACGTTCCTCGTCAAACCATTCAACACTTCTTTTCAGAATCGAGTTTGTGTGCGGCTGGCGGCGGGCGACATAAGGGTGGTTATCATTGGATGGCTCTGGGCAGTAGAATAGGTCATAGGTCATGCTCTGAGGGGGCTGGGTGGAGCAGAGTGGAGGGGGAATGGGGACAGACAGTGGAACCCTACTAAAtgccaccctatcccctatataaagggttctacatagggaacagggtgtcgtTTGAGATGCAGAAATCGGGTTGGTGTCACGTCACATGAAGTCCTCGTAGTCTTGTGCGTAACCTCCATCGAACTCTCCGTAGTCCGATAGGTCATCCTTCATCTTGGACTTCATCCCTCCGGCAGCAACCAGacctttctttttcttcttccctTTATTCAGC

Function

NR:

description
PREDICTED: eukaryotic translation initiation factor 3 subunit J-A-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU237665 True 1047 lncRNA 0.42 2 97639887 97676568

Neighbor

gene id symbol gene type direction distance location
LOC118944213 NA coding downstream 13990 97625781 ~ 97625897 (-)
LOC118944190 NA coding downstream 17703 97621775 ~ 97675000 (-)
LOC118937309 NA coding downstream 143389 97494344 ~ 97496498 (-)
LOC110502515 reln coding downstream 251934 97089207 ~ 97387953 (-)
pik3c2g LOC106561742 coding downstream 561987 97019591 ~ 97077900 (-)
LOC118944194 NA coding upstream 6370 97682938 ~ 97683118 (-)
LOC118943869 NA coding upstream 13957 97636136 ~ 97691714 (-)
LOC118944207 NA coding upstream 41172 97717740 ~ 97717837 (-)
LOC118944209 NA coding upstream 43106 97719674 ~ 97719773 (-)
LOC118943868 NA coding upstream 45424 97699305 ~ 97723186 (-)
G209858 NA non-coding downstream 21863 97617666 ~ 97618024 (-)
G209875 NA non-coding downstream 27784 97609516 ~ 97612103 (-)
G209883 NA non-coding downstream 35510 97604157 ~ 97604377 (-)
G209881 NA non-coding downstream 40290 97599359 ~ 97599597 (-)
G209874 NA non-coding downstream 40754 97595728 ~ 97599133 (-)
G209891 NA non-coding upstream 3983 97680551 ~ 97681121 (-)
G209845 NA non-coding upstream 33236 97709804 ~ 97746811 (-)
G209893 NA non-coding upstream 37623 97714191 ~ 97750984 (-)
G209844 NA non-coding upstream 50371 97726939 ~ 97771450 (-)
G209841 NA other downstream 20675 97618859 ~ 97619212 (-)
G209802 NA other downstream 137493 97501172 ~ 97502394 (-)
G209560 NA other downstream 222699 97416821 ~ 97417188 (-)
G208658 NA other downstream 1217663 96421866 ~ 96422224 (-)
G208472 NA other downstream 1505415 96134077 ~ 96134472 (-)
LOC118936884 NA other upstream 467752 98127948 ~ 98145517 (-)
LOC118943885 LOC106561728 other upstream 1241880 98914015 ~ 98946069 (-)
LOC118943882 LOC106561728 other upstream 1265906 98936783 ~ 98944041 (-)
G210765 NA other upstream 1349164 99025732 ~ 99026118 (-)
G211127 NA other upstream 1446665 99123233 ~ 99123658 (-)

Expression


Co-expression Network