G209627


Basic Information

Item Value
gene id G209627
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 97640777 ~ 97641375 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU237376
AGTctacaaatatatttttgggggggtgaatTCCTAAATTCCGTGTTTCTAGAATGTTTAAAGATTGATTACTTCTAGTTGTAAGGAGGGTAATATCGCCCTGAACATTCTTCCCCCTACATTATTTACATTTTCTAggaaaataatacaaaatgttACGATAAAGTAATTTAAGGCTAGGAAGTATTGAAGCCACACAAGTCAATGTGTGAACGGAGGCCCATATACTGCTGAAATGAATATGATGTAACCATAGTCTTAACTGTTCGTGTATTTTAATGGAGGAATGATGGCGCTGAAAATAATCTGTTATGTAGCATTTCAATAAATAGCCGTAGGGTCAAGTAGAAAACACGGCGCTGACCATTTCATCCTGGGCCTATGTTCACAAAACGTCTGAGTAGATacgctgatctagaatcagatgCTCCCCCccttcttattcattatgatcagaAAAagactaaactgatcctagagcaGCACTGCTACACTGAGAAACAACAATCAGTCTAGGTCTCCTTGGCATAACTTTGCACGGCTTGTATCAAGTGAGGTGAGAAACAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU237376 True 569 lncRNA 0.43 2 97640777 97641375

Neighbor

gene id symbol gene type direction distance location
LOC118944205 NA coding upstream 12287 97628277 ~ 97628490 (+)
LOC118944222 NA coding upstream 20112 97620557 ~ 97620665 (+)
LOC110533938 NA coding upstream 34122 97605148 ~ 97606655 (+)
LOC110500611 LOC106561734 coding upstream 44454 97528707 ~ 97596323 (+)
LOC110500594 LOC106561738 coding upstream 553022 97085929 ~ 97087755 (+)
LOC118944214 NA coding downstream 5040 97646415 ~ 97646513 (+)
LOC118944206 NA coding downstream 18193 97659568 ~ 97659781 (+)
LOC118944223 NA coding downstream 40115 97681490 ~ 97681598 (+)
LOC118944201 NA coding downstream 49413 97690788 ~ 97691001 (+)
LOC110500822 LOC106561728 coding downstream 54564 97695939 ~ 97711108 (+)
G209591 NA non-coding upstream 21688 97618617 ~ 97619089 (+)
G209644 NA non-coding upstream 48522 97591424 ~ 97592255 (+)
G209619 NA non-coding upstream 74512 97562329 ~ 97566265 (+)
G209617 NA non-coding upstream 79821 97560112 ~ 97560956 (+)
G209653 NA non-coding downstream 675 97642050 ~ 97642311 (+)
G209656 NA non-coding downstream 2832 97644207 ~ 97680150 (+)
G209658 NA non-coding downstream 7566 97648941 ~ 97653118 (+)
G209660 NA non-coding downstream 13792 97655167 ~ 97688536 (+)
G209665 NA non-coding downstream 58438 97699813 ~ 97700168 (+)
G209586 NA other upstream 154005 97486476 ~ 97486772 (+)
G208836 NA other upstream 1027318 96612429 ~ 96613459 (+)
G208404 NA other upstream 1412314 96227793 ~ 96228463 (+)
G206926 NA other upstream 2934529 94705946 ~ 94706248 (+)
G209636 NA other downstream 98686 97740061 ~ 97772765 (+)
G209759 NA other downstream 315869 97957244 ~ 97958896 (+)
G210408 NA other downstream 1055793 98697168 ~ 98700392 (+)
LOC110510476 LOC106561728 other downstream 1256149 98897524 ~ 98944948 (+)

Expression


Co-expression Network