G209845


Basic Information

Item Value
gene id G209845
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 97709804 ~ 97746811 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU237660
GATTTTATTAAATTAGGTGGATAAAATAAGACAACTTTAATCTTTAATATTGTTTATATTACCAATCCTGAAAATGTGCTGTGAAAAAGAAAAACAAGTGATAATAACCCAGTACAACCTTCTTTCCTAAATACATTTGGTCTGTTTCTCACCTCACTTGATACAAGCCGTGCAAAGTTATGCCAAGGAGACCTAGACTGATTGTTGCTTCAACTCAGTGGAAGCGATTATACTGGGTTTCTCAGTGTAGCAGTGCtgctctaggatcagtttagccttttctgatcataatgaataagaaggGGGGGAGcatctgattctagatcagcgtATCTACTCAGATGTTTTGTGAACATAGGCCCAGGATGAAATGGTCAGCGCCGTGTTTTCTACTTGACCCTACGACTATTTATTGAAATGCTACATAACAGATTATTTTCAGCGCCATCATTCCTCCATTAAAATACACGAACAGTTAAGACTATGGTTACATCATATTCATTTCAGCAGTATATGGGCCTCTGTTCACACATTGACTTGTGTGGCTTCAATACTTCCTAGCCTTAAATTACTTTATCGtaacattttgtattattctccTAGAAAATGTAAATAATGTAGGGGGAAGAATGTTCAGGGCGATATTACCCTCCTTACAACTAGAAGTAATCAATCTTTAAACATTCTAGAAACACGGAATTTAGGAattcaccccccaaaaaaatatttgtaGACTATGTGACCATGCAAACCGAGTCCTGAATTTATCTAACATGTTCATCTCAATGTTGCTTTTCTCAACTGGTCCTAAACTCCTTGACTTATTTGGACATTTTCTCCTGAAAAATACTATGATGTCAAGGATCAATATATATGTGTAATATGTGAAGAGCACCGAACTGACATTTGGAGAACTAAATTCTTTACATAACAATGTAGTATTATATTTCAGAATGCCAATAGCCATCCTTTgagtaaaacaaatatttaatttatACTTGAGAAAAATAGTAATAATCTGATTTGCACGGaacacaaaatgtattttccttcGTCAAACAGTAACAATTAAATGTTGTTTGACAGATCATTTCTTTTAAAAGATCAAATTAAATTCATTCTAGGAttggggaaaaaaaacaagtttGATGCTGGGTTTTCGCATCTCATTATGGGAGGTGAAACATTTTGGTATCCAGAACACAGTCTTATTGGTCAGTCAGTTTCGAGGAATCGTTGAAGGAATTTCTAACGAGGAGAAACAACCCTGCTGAAATCAGACGTTCCTCGTCAAACCATTCAACACTTCTTTTCAGAATCGAGTTTGTGTGCGGCTGGCGGCGGGCGACATAAGGGTGGTTATCATTGGATGGCTCTGGGCAGTAGAATAGGTCATAGGTCATGCCCTGAGGGGGCTTGGTGGAGCAGAGCGGAGGGGGAATGGGGACAGACATTGGAACCCTACTAAAtgccaccctatcccctatataaagggttctacatagggaacagggtgtcgtTTGAGACAGAAATCGGGTTGGTGTCACGTCACATGAAGTCCTCGTAGTCTTGTGCGTAACCTCCATCGAACTCTCCGTAGTCCGATAGGTCATCCTTCATCTTGGACTTCATCCCTCCGGCAGCAACCACacctttctttttcttcttccctTTATTCAGCTGCTGTTGGAAATAAAGACGGATTCGTTTTGTCTTATGACAGTAATTCATTTTATCATCATGTCCATTAGGGCACGcctcagtctgttttcttccgtttgatgcctaatgaacatgacccggACTGAATACCGGTCTAAGTAGACCATGGATACTGGTGATAAATGTCTCTGTATGTAACCATTTTAAAAGCTTGCTTTTGGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU237660 True 1886 lncRNA 0.39 2 97709804 97746811

Neighbor

gene id symbol gene type direction distance location
LOC118943869 NA coding downstream 18361 97636136 ~ 97691714 (-)
LOC118943865 LOC106593246 coding downstream 19972 97626323 ~ 97690421 (-)
LOC118944194 NA coding downstream 26686 97682938 ~ 97683118 (-)
LOC118943862 NA coding downstream 49340 97655151 ~ 97660464 (-)
LOC118944196 NA coding downstream 61756 97647861 ~ 97648048 (-)
LOC118944208 NA coding upstream 8819 97755630 ~ 97755727 (-)
LOC118944211 NA coding upstream 10753 97757564 ~ 97757663 (-)
LOC118943870 NA coding upstream 13071 97759882 ~ 97761086 (-)
LOC118936884 NA coding upstream 381137 98127948 ~ 98145517 (-)
LOC110500713 LOC106561713 coding upstream 566212 98313023 ~ 98352485 (-)
G209860 NA non-coding downstream 20699 97652692 ~ 97689105 (-)
G209834 NA non-coding downstream 26048 97647549 ~ 97683756 (-)
G209888 NA non-coding downstream 27726 97646404 ~ 97682078 (-)
G209851 NA non-coding upstream 17478 97764289 ~ 97769193 (-)
G209838 NA non-coding upstream 32285 97779096 ~ 97780558 (-)
G209901 NA non-coding upstream 35246 97782057 ~ 97782475 (-)
G209902 NA non-coding upstream 35890 97782701 ~ 97782951 (-)
G209841 NA other downstream 90592 97618859 ~ 97619212 (-)
G209802 NA other downstream 207410 97501172 ~ 97502394 (-)
G209560 NA other downstream 292616 97416821 ~ 97417188 (-)
G208658 NA other downstream 1287580 96421866 ~ 96422224 (-)
G208472 NA other downstream 1575332 96134077 ~ 96134472 (-)
LOC118943885 LOC106561728 other upstream 1171637 98914015 ~ 98946069 (-)
LOC118943882 LOC106561728 other upstream 1195663 98936783 ~ 98944041 (-)
G210765 NA other upstream 1278921 99025732 ~ 99026118 (-)
G211127 NA other upstream 1376422 99123233 ~ 99123658 (-)

Expression


Co-expression Network