G209838


Basic Information

Item Value
gene id G209838
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 97779096 ~ 97780558 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU237652
GAAGGgtaattcaaatgtatttataaagccatgtttacatcagcagatatcacaaagtgctgtacagatacCCAACTTAAAACCTCAAACCGCAAGCAATGCAGATTATACTGAACAGAGAtctctacactgagtatacaaaacattaagaacaccttcctaatattgagttgccacccccccccctttccacttcagaacagcctcaattcgtcagggcatggactctacaaggtgttgaaagcgttccacagggatgctggccccatgttgactcccaatgcttcccacagttgtgtcaagttgtctggatgtcctttgggtggtggaccattcttgatacacacaggaaactgttgagcgtgaaaaacccagcagcgttgcagttcttgacccaaaccggtgcgcctgacacctactaccatcccCCGTACAAAAGCACTTAAttattttgttttgcccattcaccctctgaatgacacacatacacaatccatggctCAAGACTTAAAAActcttctttaacccgtctcctccccttcatctacactgattgaagtggatttaacaagtgacatcaataagggaacatagctttcacctggtcagtctatgtcatggaaaggacaggtgttcctaattttttgtccactcagtgtattgaTGCTTCTCATTCCATCACATTTGAAAACAATGAAACATAAGAATATTTAAGATTATCTCTGCGTTGAGATTTCTCTTTGCGATCCTCTATTTGATTAACATTtataaaaagttttaaaaaaaaacgttttattgCTTACACAAAAAAGGTATTTATGATCTATAGAAAACTTATCTTCCCCACTGTGCACTATTCTAGTGAGCCTGTCTGGAACAATTCCATTCTCTAGCCTCAGTCATCAGCGGTTTACAGAACAAAATAGTGGCGGATTGACCCCTTGTTATTGTTTGAATCACAGattgccttttaaaaaaaaaaagatttatagAGAACTGAATTACCCGTGTAACTACTCTGACTTAACAGATTCTGCCTGGAACAGATCAGGGATGTTGAGCTGGGTTTTAGACACGGCTAGTGCAGGATACAATGGTTCACTGAACCTCTGTTTAAAACAATGGAGCAAGCTCAGAGCGCCCCCTTGTGCCACTTTATAGAACGACAGGCTACCTTCCTCGAAATCCAGCAACACCCCAACCCTTCCCAGTCCGCCGAC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU237652 True 1220 lncRNA 0.42 2 97779096 97780558

Neighbor

gene id symbol gene type direction distance location
LOC118943870 NA coding downstream 18296 97759882 ~ 97761086 (-)
LOC118944211 NA coding downstream 21433 97757564 ~ 97757663 (-)
LOC118944208 NA coding downstream 23369 97755630 ~ 97755727 (-)
LOC118943868 NA coding downstream 55913 97699305 ~ 97723186 (-)
LOC118944209 NA coding downstream 59323 97719674 ~ 97719773 (-)
LOC118936884 NA coding upstream 347390 98127948 ~ 98145517 (-)
LOC110500713 LOC106561713 coding upstream 532465 98313023 ~ 98352485 (-)
lmo2 rbtn2 coding upstream 643457 98424015 ~ 98426658 (-)
LOC110500720 LOC106561717 coding upstream 694176 98474734 ~ 98513861 (-)
edc3 LOC106561715 coding upstream 741440 98521998 ~ 98535690 (-)
G209844 NA non-coding downstream 7646 97726939 ~ 97771450 (-)
G209851 NA non-coding downstream 9903 97764289 ~ 97769193 (-)
G209893 NA non-coding downstream 28112 97714191 ~ 97750984 (-)
G209845 NA non-coding downstream 32285 97709804 ~ 97746811 (-)
G209901 NA non-coding upstream 1499 97782057 ~ 97782475 (-)
G209902 NA non-coding upstream 2143 97782701 ~ 97782951 (-)
G209907 NA non-coding upstream 10615 97791173 ~ 97791393 (-)
G209914 NA non-coding upstream 20439 97800997 ~ 97801343 (-)
G209915 NA non-coding upstream 21043 97801601 ~ 97801957 (-)
G209841 NA other downstream 159884 97618859 ~ 97619212 (-)
G209802 NA other downstream 276702 97501172 ~ 97502394 (-)
G209560 NA other downstream 361908 97416821 ~ 97417188 (-)
G208658 NA other downstream 1356872 96421866 ~ 96422224 (-)
G208472 NA other downstream 1644624 96134077 ~ 96134472 (-)
LOC118943885 LOC106561728 other upstream 1137890 98914015 ~ 98946069 (-)
LOC118943882 LOC106561728 other upstream 1161916 98936783 ~ 98944041 (-)
G210765 NA other upstream 1245174 99025732 ~ 99026118 (-)
G211127 NA other upstream 1342675 99123233 ~ 99123658 (-)

Expression


Co-expression Network