G210004


Basic Information

Item Value
gene id G210004
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 98085978 ~ 98090437 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU237871
CTGAGTTCTGGAAGTTGACATCTGGTCGATTTTTCAAAGCTCttggatttgtaaaaaaaaaaaaaaatgtatttaacttttttattttttacctttatttaacctttatttaacctttatttaactaggcaagtcggttaagaacagattcgtatttacaatgacaccgGGCCACAccgggccaaacctggacgacgctgggacaattgtgcgctgcACTATGGGCCTCACAATCATGGCCCCGTTGTGATACATGAAAAACACTGAAATGAGAAATGTAGCTTCATTAACTTGAATGACAACAATCATGAATTGCATAATGGGACTTGAGGACAtaactttttttttggggggggggaccaCAAAAACAGTAATCCTTCCTAAAACACAGTCCTGATAGTCATTTGTGTTTTTAATGTTGTGATGTTGTGAATTGTGTGGAATGGTCTGGCAGTCATGGTGGCGACGCTGTGTGATTGGAGACCAGAGACCTAAAGGGGACTAACACTCTCAGTCTCATTCTGGGGTCTAATAGCTATTTAAAGACAGCCAAGCTCCCATCCTTCTGATGATTCAGCCCCAGATTGTGCTGTTGATAGCAGAACGGCGGGGGGGGGGACCACAAAAACAGTAATCCTTCCTAAAACACAGTCCTGATAGTCATTTGTGTTTTTAATGTTGTGATGTTGTGAATTGTGTGGAATGGTCTGGCAGTCATGGTGGCGACGCTGTGTGTTTGGAGACCAGAGACCTAAAGAGGACTAACACTCTCAGTCTCATTCTGGGGTCTAATAGCTATTTAAAGACAGCCAAGCTCCCATCCTTCTGATGATTCAGCCCCAGGTTGTGCTGTTGATAGCAGAACGGCGACACCTGTTGGCCAGAGGCTGTAGCTACACCATAAACAATAACAGACAATGTCTAAGGCTtaaatggttccctattccctatatagtgcatggGATTTACAGGACCCCATAGGGAATACATAGgcccctgatcaaaagtagtgtactatatagggaatagggtgccctttgcaATGAACCCAATAAGAGtggaaacaaaaaaaacaacagcaTTATGAAAACCAAAAACTGTGCGGGCGGGCGGGCTAAGTCGACCTCTTTCTTTCCTGTATGGAACGCCGATCCAGCTCAGTGACTCACACATCCACTTATTTAGCCCTGTCTAAAGTCATATGTACaatcattatttttttaaacaacatggaaaaaaaggaggaaaataatgaaagaaagtaaaacacacacacacaaacatcatacatacagtatataacatcctacagtatataacatactacagtatataacataCTTCATGCAAAACTATTCATTCTCCTTGGTAGCGAGTCATTTTTCAGAGACCAAGCAGACCAGACACACCtgtgagagagatggagtaagggagagaaagagaggtggagctGAGTGGTTCTCAGAGCCTCAGTGGAGAGACTGATGAGAGACCCCAGCAGTCTAGCCCTGGGTAGGGCAGGCCTCTCCACCCCAAAAACCATGGTTCATcagcctcccctctctatctcctcccctctttcccatctctagctcctcccctctctctctccatctctagctcctcccccctctctctccatctctagctcctcccctctctctctccatctctagctcctcccctctctctccatctctagctcctcccctctctctccatctctagctcctcccctctctctctccatctctagcttctcccctctctctctccatctctagctcctcccccctctctctccatctctagctcctcccccctctctctccatctctagctcctcccctctctctctctccatctctagctcctcccctctctagctcctcccctctctctccatctctagctCCTCCCCAGGCCCCATATTcatagtaggagtgctgatcttggatcagttttTCCTTTAAGATTATTGAATTGATCATAATGGAAAGGGGATAGCTGATCTCAGATCAGCACaggcccacatctctctctctctctctctctgattaacAGCTCACAAAACATCACTAAAGTGCTCTTACAAAGActgagctagctaactaactaacttgcTTACTAACTAAATACCACGATAAGCGCTTcaagaatagaacagaacagaaggaCATACAGGTGTTTGTTTGAATACGGAAGAAGGACATGAAACCTCGCATCATAATGGCTTTAAAGGACTCTGTAATAACCAAAAGCTGAATTCATAACCTTAAAACCTTTAATCAGTTCATTACCTAAATCTGAGtgagaaaaaacaaacataatgTCACTTAAAAAAATAATGAAGACAACAGCGATGTGTGTGTGAGCCCACGGCCATGTGTGAGAACTGCTCCCAGATCTGCCTGTGTCCTGGCCAACTCCACTGCTGTCATTGGCCAGTTGTGTTTGGCCTGACgatgagtgacaaggagttggccTGATAGTCCAAACAGACTGCTATTCAGGCTGCAGGTCCAGTTGTTGTGCTTGAATGGTTTCAGACAGGGGTGACAGACTGGGTCAGTTACCAGGCTAGGAAAGGGTGAATGGTACCAGACAGGGTGACAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGAATGGTATCAGACAGGAGTGACAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGAATGGTATCAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGAATGGTaccagacagagtgacagactggGTCAGTTACCAGGCTAGGAGAGGGTGAATGGTATCAGACAGGAGTGACAGACTGGGACAGTTACCAGGCTAGGAGAGGGTGAATGGTATCAGACTGGATCAGTTACCAGGCTAGGAGAGGGTGAATGGTATCAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGAATGGTATCAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGAATGGTACCAGACTGGGTCAGTTACCAAGCTAGGAGAGGGTGACTGGTATCAGACAGGAGTGACAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGACTGGTTTCAGACAGGAGTGACAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGAATGGTATCAGACAGGAGTGACAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGAATGGTATCACGCTGGATCAGTTACCAGGCTAGGAGAGGGTGAATGGTATCAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGACTGGTTTCAGACAGGAGTGACAGACTGGAACAGTTACCAGGCTAGGAGAGGGTGACTGGTTTCAGACAGGAGTGACAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGACTGGTTTCAGACAGGAGTGACAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGACTGGTTTCAGACAGGAGTGACAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGAATGGTATCAGACAGGAGTGACAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGAATGGTATCAGACAGGAGTGACAGACTGGGACAATTACCAGGCTAGGAGAGGGTGACTGGTTTCAGACAGGAGTGACAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGAATGGTATCACGCTGGATCAGTTACCAGGCTAGGAGAGGGTGAATGGTATCAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGACTGGTTTCAGACAGGAGTGACAGACTGGAACAGTTACCAGGCTAGGAGAGGGTGACTGGTTTCAGACAGGAGTGACAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGACTGGTTTCAGACAGGAGTGACAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGACTGGTTTCAGACAGGAGTGACAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGACTGGTTTCAGACAGGAGTGACAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGAATGGTATCAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGAATGGTTTCAGACAGGAGTGACAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGAATGGTATCAGACTGGGTCAGTTACCAGGCTAGGAGAGGGTGAATGGTACCAGAcagttgtttgtttctgtgtttcaCTGTGAGAGTGTGTCTAtgctatgcatgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtaggtgtgcATGACTTTTGCTGGTCTTCATAGTCAGTACTTGGGAACTTTGGTGTAATCCTCCTGGACAACACTCTTACAGAGACACATGGACAGAATCAT

Function

NR:

description
PREDICTED: proline-rich protein 2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU237871 True 4351 lncRNA 0.48 3 98085978 98090437

Neighbor

gene id symbol gene type direction distance location
LOC118943870 NA coding downstream 325178 97759882 ~ 97761086 (-)
LOC118944211 NA coding downstream 328315 97757564 ~ 97757663 (-)
LOC118944208 NA coding downstream 330251 97755630 ~ 97755727 (-)
LOC118943868 NA coding downstream 362795 97699305 ~ 97723186 (-)
LOC118944209 NA coding downstream 366205 97719674 ~ 97719773 (-)
LOC118936884 NA coding upstream 37511 98127948 ~ 98145517 (-)
LOC110500713 LOC106561713 coding upstream 222586 98313023 ~ 98352485 (-)
lmo2 rbtn2 coding upstream 333578 98424015 ~ 98426658 (-)
LOC110500720 LOC106561717 coding upstream 384297 98474734 ~ 98513861 (-)
edc3 LOC106561715 coding upstream 431561 98521998 ~ 98535690 (-)
G210042 NA non-coding downstream 3593 98081633 ~ 98082385 (-)
G210033 NA non-coding downstream 33844 98051490 ~ 98052134 (-)
G210030 NA non-coding downstream 37534 98044466 ~ 98048444 (-)
G210012 NA non-coding downstream 51061 98034229 ~ 98034917 (-)
G210006 NA non-coding downstream 70856 98010776 ~ 98015122 (-)
G210125 NA non-coding upstream 60996 98151433 ~ 98189273 (-)
G210139 NA non-coding upstream 79955 98170392 ~ 98171401 (-)
G210152 NA non-coding upstream 109298 98199735 ~ 98200281 (-)
G210153 NA non-coding upstream 111429 98201866 ~ 98202232 (-)
G210166 NA non-coding upstream 144887 98235324 ~ 98236594 (-)
G209841 NA other downstream 466766 97618859 ~ 97619212 (-)
G209802 NA other downstream 583584 97501172 ~ 97502394 (-)
G209560 NA other downstream 668790 97416821 ~ 97417188 (-)
G208658 NA other downstream 1663754 96421866 ~ 96422224 (-)
G208472 NA other downstream 1951506 96134077 ~ 96134472 (-)
LOC118943885 LOC106561728 other upstream 828011 98914015 ~ 98946069 (-)
LOC118943882 LOC106561728 other upstream 852037 98936783 ~ 98944041 (-)
G210765 NA other upstream 935295 99025732 ~ 99026118 (-)
G211127 NA other upstream 1032796 99123233 ~ 99123658 (-)

Expression


Co-expression Network