G209723


Basic Information

Item Value
gene id G209723
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 98088789 ~ 98090493 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU237503
gctagagatggagagagaggggggaggagctagagatggagagagagaggggaggagctagagatgggaaagaggggaggagatagagaggggaggctgATGAACCATGGTTTTTGGGGTGGAGAGGCCTGCCCTACCCAGGGCTAGACTGCTGGGGTCTCTCATCAGTCTCTCCACTGAGGCTCTGAGAACCACTCagctccacctctctttctctcccttactccatctctctcacaGGTGTGTCTGGTCTGCTTGGTCTCTGAAAAATGACTCGCTACCAAGGAGAATGAATAGTTTTGCATGAAGtatgttatatactgtagtatgttatatactgtaggatgttatatactgtatgtatgatgtttgtgtgtgtgtgttttactttctttcattattttcctcctttttttccatgttgtttaaaaaaataatgattGTACATATGACTTTAGACAGGGCTAAATAAGTGGATGTGTGAGTCACTGAGCTGGATCGGCGTTCCATACAGGAAAGAAAGAGGTCGACTTAGCCCGCCCGCCCGCACAGTTTTTGGTTTTCATAAtgctgttgttttttttgtttccaCTCTTATTGGGTTCATtgcaaagggcaccctattccctatatagtacactacttttgatcaggggcCTATGTATTCCCTATGGGGTCCTGTAAATCccatgcactatatagggaatagggaaccatttaAGCCTTAGACATTGTCTGTTATTGTTTATGGTGTAGCTACAGCCTCTGGCCAACAGGTGTCGCCGTTCTGCTATCAACAGCACAACCTGGGGCTGAATCATCAGAAGGATGGGAGCTTGGCTGTCTTTAAATAGCTATTAGACCCCAGAATGAGACTGAGAGTGTTAGTCCTCTTTAGGTCTCTGGTCTCCAATCACACAGCGTCGCCACCATGACTGCCAGACCATTCCACACAATTCACAACATCACAACATTAAAAACACAAATGACTATCAGGACTGTGTTTTAGGAAGGATTACTGTTTTTGtggtccccccccccaaaaaaaaagttaTGTCCTCAAGTCCCATTATGCAATTCATGATTGTTGTCATTCAAGTTAATGAAGCTACATTTCTCATTTCAGTGTTTTTCATGTATCACAACGGGGCCATGATTGTGAGGCCCATAGTgcagcgcacaattgtcccagcgtcgtccaggtttggcccggTGTGGCCcggtgtcattgtaaatacgaatctgttcttaaccgacttgcctagttaaataaaggttaaataaaggttaaataaaggtaaaaaataaaaaagttaaatacatttttttttttttttacaaatccaaGAGCTTTGAAAAATCGACCAGATGTCAACTTCCAGAACTCAGATGATGCTAAAAGCTTTTTATTGTTCAAAGTTTTTTTACTCATTTACAGAAATTCT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU237503 True 1445 lncRNA 0.42 2 98088789 98090493

Neighbor

gene id symbol gene type direction distance location
LOC118943872 cd82 coding upstream 2642 98026335 ~ 98086147 (+)
LOC118943873 NA coding upstream 70908 98015424 ~ 98017881 (+)
LOC110500615 LOC106561729 coding upstream 73637 97904868 ~ 98015152 (+)
si:dkey-29p10.4 LOC106561728 coding upstream 309264 97766568 ~ 97779525 (+)
LOC118944204 NA coding upstream 328431 97759785 ~ 97761071 (+)
LOC118936883 NA coding downstream 796 98091289 ~ 98092512 (+)
LOC118943874 tspan18 coding downstream 71169 98161662 ~ 98269443 (+)
gp137 gp137 coding downstream 347392 98437885 ~ 98453966 (+)
LOC110500731 LOC106561719 coding downstream 449919 98540412 ~ 98572764 (+)
LOC110500756 pk coding downstream 523257 98613750 ~ 98633108 (+)
G209791 NA non-coding upstream 6371 98081857 ~ 98082418 (+)
G209784 NA non-coding upstream 40544 98047926 ~ 98048245 (+)
G209776 NA non-coding upstream 68332 98019869 ~ 98020457 (+)
G209774 NA non-coding upstream 79327 98008873 ~ 98009462 (+)
G209633 NA non-coding downstream 16381 98106874 ~ 98108096 (+)
G210053 NA non-coding downstream 41095 98131588 ~ 98131869 (+)
G210054 NA non-coding downstream 42916 98133409 ~ 98133672 (+)
G210060 NA non-coding downstream 48805 98139298 ~ 98139533 (+)
G210082 NA non-coding downstream 89997 98180490 ~ 98181011 (+)
G209759 NA other upstream 130953 97957244 ~ 97958896 (+)
G209636 NA other upstream 316024 97740061 ~ 97772765 (+)
LOC110500822 LOC106561728 other upstream 389013 97695939 ~ 97711108 (+)
G209591 NA other upstream 469700 97618617 ~ 97619089 (+)
G209586 NA other upstream 602017 97486476 ~ 97486772 (+)
G210408 NA other downstream 606675 98697168 ~ 98700392 (+)
LOC110510476 LOC106561728 other downstream 807031 98897524 ~ 98944948 (+)
G210484 NA other downstream 812295 98902788 ~ 98926406 (+)
G210823 LOC106561768 other downstream 1146885 99237378 ~ 99238258 (+)
G210983 LOC106561766 other downstream 1629686 99720179 ~ 99721983 (+)

Expression


Co-expression Network