XLOC_021496 (slc16a7)


Basic Information

Item Value
gene id XLOC_021496
gene name slc16a7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 9867483 ~ 9889330 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042718
GGCTCTTGTATATGATTCCAGCTGGTCTTATATGCCCAGCTTGTGTGGCTCTAGATTTGTTCACATAGTCAGGCTTCTGTCCATTGCTGATCCGTTCTACCTGGAAGAGAGGGAGAACAAACATTATCATTAaatgGGCATGTCACTCCACGTGATACTGAGCATTACAAGAAAAGCACCTGATAAGAACAAAAGTTTGCGACATGAACATGTAGCCATCTGAAAGCTCTGTCAGCTCATGCAGAAAGGAAAGCACACCACGAAACATGCCCCCTTCAGCCAGCACAAACCTGGGCTACACCCCTCCAGATGGAGGCTGGGGTTGGGCTGTGGTGTTTGGATCGTTTATCTCCATCGGCTTCTCCTACGCCTTCCCCAAATCCCTCACCATCTACTTCAAAGAAATCCAGGAGTATTTCTCCATCTCCTACAGCCAGATCGCCTGGGTCTCCTCCATTATGCTGGCGACCATGTATGCAGGAGGACCTGTGAGCAGTATTTTGGTTAACCGATATGGGAGCCGTCCTGTGGTGATTGCTGGTGGGCTTATGGTTGGGGTTGCTATGGTAACGGCTTCTTTTGGCACCAGCATTTTGCATTTGTATTTATGCGTTGGAGTCATTGGAGGCTTTGGCTTGGCTTTTAACCTGCAACCAGCTCTTACAATAATCGGCAAGTACTTTCTTGTCAAAAGGCCAATGGCAAATGGTATAGCAATGGCGGGCAGCCCAGTCTTCCTGTCTACCCTGGCTCCAGTCAACCAATTTCTTTTTGACCAGTTTGGATGGCGAGGAAGCTTCTTCATTCTCGGAGGAGTGCTGTTCAACTGTTGTGTAGCTGGATCTCTAATGAGACCCATCAAAATCCCAGTGAGTAAAACCACTGAAGACAACATCAGCCCTCAGACAGCAGGACAAGACGAGTCCAAACCCTCAGGCTGTTCTTCAAAGCTCAACCAATTCATAGACATCTCCCTCTTCAAGCACAGAGGCTTCCTCATCTATCTGGTAGGGAATGTACTCATGTTTTTTGGATTTTTTGCCCCTGTGGTCTTCTTGGCACCATATGCCAAGCATCAGGGAGTAGACGAGTACTCTGCAGCATTCCTGCTCTCTATATTTGCTCTTGTAGACATGTTTGCACGTCCAGGAACCGGTTTGGTCGCCAACACTAAATGGATCAGACCCAAGATCCAGTATTTCTTCAGTTTTGCTGTGACATATAATGGTTTGTGCCATTTAATGTGCCCACTTTTACCAGGTTACATAGACCTGGTGGTTTACGCGGTGTTATTTGGCCTGGCTTTTGGCATGGTTTGCGCTCTTTTGTTTGAGGTACTCATGGATTTGGTTGGAGCTCAACGGTTCTCTAGTGCGGTTGGACTTGCTACGATTATAGAGTGTGGACCCGTCCTGCTGGGGCCACCAATATCTGGTTTACTGGTCGACATCTTCATGGATTATAAATACATGTACTTTGCTTGTGGCATGATGATGCTGGCTGGAGGTGTCTTCCTCTTCATTATGAACTATTACAACTACAGATGGTTAAAAAAGGAGGAAAAACAGAGAAATGCAGAAGAGCTACAGATCTTCTCAACCAAAGAACTTGCCGCCATTGATGAAGAGATCAAACTTAGTATTGAGGAGAAGCTTAAAGACTAGAGCTGCAAATACCATTGAATCTGTCCTCTTTTCTTTAAGAaacttccatctatccatccatctatctagaacaggggtcaccaaacttgttcctggagagctggtgccctgctgagtttagctcaaaCCCCTTAATCAAACtcatctgaacaagctaatcaaggtcttaggtaTACATGATTTCTCCAGACAGGTATTTTGAGGCAGGTTGGAGTTAAATTCTGCAGGAACACCAGCCCTCCAAGAACAAGACTGgtgttttaaagattaaattgGTTTATAATATTACCTTTAAGACTTTTGCTAAGAAAAAGGTCAATTATAATGTGCAAACCAATCCTAGCACCAGGGAAAA

Function

symbol description
slc16a7 Predicted to enable monocarboxylic acid transmembrane transporter activity. Predicted to be involved in monocarboxylic acid transport. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of plasma membrane. Is expressed in brain; gill; and heart.

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0015718 monocarboxylic acid transport biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function
GO:0008028 monocarboxylic acid transmembrane transporter activity molecular_function

KEGG:

id description
ko02000 Transporters

ZFIN:

id description
ZDB-GENE-051113-248 Predicted to enable monocarboxylic acid transmembrane transporter activity. Predicted to be involved in monocarboxylic acid transport. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of plasma membrane. Is expressed in brain; gill; and heart.

Ensembl:

ensembl_id ENSDARG00000021573

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042718 True 2019 mRNA 0.45 7 9867483 9889330

Neighbor

gene id symbol gene type direction distance location
XLOC_021495 NA coding upstream 1545 9865701 ~ 9865938 (+)
XLOC_021494 CU466281.1 coding upstream 140051 9727410 ~ 9727432 (+)
XLOC_021493 CR388392.1 coding upstream 249148 9618213 ~ 9618335 (+)
XLOC_021492 adrm1 coding upstream 300177 9560797 ~ 9567306 (+)
XLOC_021491 osbpl2b coding upstream 315516 9508538 ~ 9551967 (+)
XLOC_021497 NA coding downstream 48915 9938245 ~ 9952826 (+)
XLOC_021498 zgc:171775 coding downstream 257212 10146542 ~ 10165033 (+)
XLOC_021499 krt18a.1 coding downstream 458521 10347851 ~ 10351754 (+)
XLOC_021500 krt18a.2 coding downstream 463591 10352921 ~ 10355552 (+)
XLOC_021501 eif4ba coding downstream 507512 10396842 ~ 10453077 (+)
XLOC_021490 NA non-coding upstream 463866 9396668 ~ 9403617 (+)
XLOC_021488 CU137717.1 non-coding upstream 558922 9307574 ~ 9308561 (+)
XLOC_021503 BX323028.1 non-coding downstream 711994 10601324 ~ 10606546 (+)
XLOC_021505 NA non-coding downstream 1334794 11224124 ~ 11224605 (+)
XLOC_021508 CR735125.1 non-coding downstream 2046254 11935584 ~ 11935700 (+)
XLOC_021510 AL929345.3 non-coding downstream 2194227 12083557 ~ 12083671 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000021_03572797_03577241 SLC16A7 coding CI01000021 null 3572769 ~ 3577582 (-)