G210483


Basic Information

Item Value
gene id G210483
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 98893442 ~ 98894115 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU238515
gaccatctctctggattccagaaggcatgaggacccagatgctatacagtgggaaaaccagcctggcaacataagctcacaagctatcagaaagttgtatggcaaccacctccggtgccaaatagaactggcagacatagacattcagtacaagaagaaaaagatggaaaatcttgcactggagttcgaaataaaaaagaggacaattaggaaactggaccttgaaataaaaaaaacttgagagggagctccaagaagatgacacagctcaaaataaaaattagcaatcagtacaaccaagtcatcgttataaggcatcgccctcttttgcccacccccccc
>TU238514
aattccagctgcgctaattgtattgtgttcacagagctcacaagctatcagaaagttgtatggcaaccacctccggtgccaaatagaactggcagacatagacattcagtacaagaagaaaaagatggaaaatcttgcactggagttcgaaataaaaaagaggacaattaggaaactggaccttgaaataaaaaaaacttgagagggaggtgagatatgccttcaatgtacactgtatgctaactgtaacacaaatgtattaatcattatttttctttcctcccccagctccaagaagatgacacagctcaaaataaaaattagcaatcagtacaaccaagtcatcgttataaggcatcgccctcttttgcccacccccccc

Function

NR:

description
uncharacterized protein LOC110534718 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU238515 False 342 lncRNA 0.53 5 98893442 98894115
TU238514 True 382 lncRNA 0.40 2 98893636 98894115

Neighbor

gene id symbol gene type direction distance location
LOC110500657 parp16 coding upstream 25081 98854685 ~ 98868361 (+)
LOC118936885 NA coding upstream 93573 98798732 ~ 98799869 (+)
LOC110500756 pk coding upstream 260334 98613750 ~ 98633108 (+)
LOC110500731 LOC106561719 coding upstream 320678 98540412 ~ 98572764 (+)
gp137 gp137 coding upstream 439476 98437885 ~ 98453966 (+)
LOC110510476 LOC106561728 coding downstream 4380 98897524 ~ 98944948 (+)
LOC118944192 NA coding downstream 13327 98907442 ~ 98907622 (+)
LOC118944193 NA coding downstream 36242 98930357 ~ 98930537 (+)
LOC118943887 NA coding downstream 55361 98949476 ~ 98950379 (+)
LOC118944187 NA coding downstream 58486 98859346 ~ 98986848 (+)
G210310 NA non-coding upstream 19716 98872945 ~ 98873726 (+)
G210276 scamp5 non-coding upstream 38769 98846805 ~ 98854673 (+)
G210472 NA non-coding upstream 58256 98834872 ~ 98835186 (+)
G210466 NA non-coding upstream 68981 98822259 ~ 98824461 (+)
G210465 NA non-coding upstream 71262 98820626 ~ 98822180 (+)
G210303 NA non-coding downstream 16058 98910173 ~ 98958171 (+)
G210492 NA non-coding downstream 85713 98979828 ~ 98980286 (+)
G210508 NA non-coding downstream 120937 99015052 ~ 99015276 (+)
G210308 NA non-coding downstream 127942 99022057 ~ 99022698 (+)
G210288 NA non-coding downstream 130883 99024998 ~ 99025499 (+)
G210408 NA other upstream 193050 98697168 ~ 98700392 (+)
G209759 NA other upstream 935606 97957244 ~ 97958896 (+)
G209636 NA other upstream 1120677 97740061 ~ 97772765 (+)
LOC110500822 LOC106561728 other upstream 1193666 97695939 ~ 97711108 (+)
G209591 NA other upstream 1274353 97618617 ~ 97619089 (+)
G210484 NA other downstream 8673 98902788 ~ 98926406 (+)
G210823 LOC106561768 other downstream 343263 99237378 ~ 99238258 (+)
G210983 LOC106561766 other downstream 826064 99720179 ~ 99721983 (+)
LOC110502581 LOC106561777 other downstream 911053 99777695 ~ 99818794 (+)

Expression


Co-expression Network