G210730


Basic Information

Item Value
gene id G210730
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 98932956 ~ 98955541 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU238834
cacaaccggccgtgattaggagtcccatactgcggcgcacaattggcccagtgtcgtccgggtcggtaggctgtcattgtaaataagaattagttcttaactgacttgcctagttaaataaatgagtCGAGAGGAGGAAACAaaagaagaggatgaagaggttggacgaagatgaggaagaggaggaggtgtggtgagCTTTAGTGGTAATACTGGAGAAAGGCCTGATGAGGTTATTCTAGTCCTATACCTCCATCGTGAgttaggaggaggaagaggaggaggtgtggtgagCTTTAGTGTTAATACTGGAGAAAGGCCTGTCCCAGTCTCCTCTCTATATGTACcactaatgtaaatgtaaatatcaAAACagataccaaacattaagaaacTATAAGGAAGAGAAGAGTAACTGCAATGAAA
>TU238835
gcacaattggcccagtgtcgtccgggttttgcCCGgtcggtaggctgtcattgtaaataagaattagttcttaactgacttgcctagttaaataaatgagtCGAGAGGAGGAAACAaaagaagaggatgaagaggttggacgaagatgaggaagaggaggaggtgtggtgagCTTTAGTGGTAATACTGGAGAAAGGCCTGATGAGGTTATTCTAGTCCTATACCTCCATCGTGAgttaggaggaggaagaggaggaggtgtggtgagCTTTAGTGTTAATACTGGAGAAAGGCCTGTCCCAGTCTCCTCTCTATATGTACcactaatgtaaatgtaaatatcaAAACagataccaaacattaagaaacTATAAGGAAGAGAAGAGTAACTGCAATGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU238834 False 426 lncRNA 0.44 3 98932956 98955541
TU238835 True 400 lncRNA 0.43 2 98932956 98933448

Neighbor

gene id symbol gene type direction distance location
LOC118944228 NA coding downstream 970 98931878 ~ 98931986 (-)
LOC118943885 LOC106561728 coding downstream 11920 98914015 ~ 98946069 (-)
LOC118944227 NA coding downstream 23886 98908962 ~ 98909070 (-)
LOC110510475 LOC106561728 coding downstream 34832 98895140 ~ 98898124 (-)
LOC118943884 LOC106561728 coding downstream 40813 98876074 ~ 98892143 (-)
LOC110500849 LOC106561754 coding upstream 3487 98959028 ~ 98967298 (-)
ctdspl2a LOC106561755 coding upstream 19303 98974844 ~ 98996174 (-)
LOC110500795 LOC106561757 coding upstream 41870 98997411 ~ 99013377 (-)
galk2 galk2 coding upstream 198718 99154259 ~ 99166352 (-)
tjp1b tjp1 coding upstream 266309 99221850 ~ 99503455 (-)
G210728 NA non-coding downstream 22663 98909936 ~ 98910293 (-)
G210656 NA non-coding downstream 91040 98835671 ~ 98841916 (-)
G210710 NA non-coding downstream 122953 98809799 ~ 98810003 (-)
G210707 NA non-coding downstream 145925 98786626 ~ 98787031 (-)
G210706 NA non-coding downstream 146496 98785611 ~ 98786460 (-)
G210738 NA non-coding upstream 8210 98963751 ~ 98964109 (-)
G210757 NA non-coding upstream 61172 99016713 ~ 99016971 (-)
G210760 NA non-coding upstream 62606 99018147 ~ 99018442 (-)
G211106 NA non-coding upstream 139558 99095099 ~ 99095361 (-)
G211107 NA non-coding upstream 140397 99095938 ~ 99096218 (-)
LOC118936884 NA other downstream 787439 98127948 ~ 98145517 (-)
G209841 NA other downstream 1313744 97618859 ~ 97619212 (-)
G209802 NA other downstream 1430562 97501172 ~ 97502394 (-)
G209560 NA other downstream 1515768 97416821 ~ 97417188 (-)
G208658 NA other downstream 2510732 96421866 ~ 96422224 (-)
G210765 NA other upstream 70191 99025732 ~ 99026118 (-)
G211127 NA other upstream 167692 99123233 ~ 99123658 (-)
LOC118936886 NA other upstream 660135 99615676 ~ 99619142 (-)
LOC110502568 LOC106561766 other upstream 755160 99697219 ~ 99725327 (-)
G211402 NA other upstream 900772 99856313 ~ 99857855 (-)

Expression


Co-expression Network