G210308


Basic Information

Item Value
gene id G210308
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 99022057 ~ 99022698 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU238273
GAGGTACTTACATCGCACGGGATTATCTCACCTTCATTGATCTGTTCCGGCCGGCTTTGTATCTGGAGACTCGTGCCATCAACAAGGTGAGGGACACTACGTCCAGCCAGTACTTTGGTTCATTAGGCGAAGATCCTGCTGAAGATGGTCTGATGGGTGTTCCCAGACGTTGCCGGCAGTGGTGGTGCAGGCAGCCTAACGTCATCCCCGCAAAGGAGAAGGTGGACGTCAAACAAATCAACCAGGAGAAGTGCCAGACCAGTATGGAGAAATTCGTCGTTAACGGATGCATCATAACA

Function

NR:

description
PREDICTED: gamma-2-syntrophin isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU238273 True 299 lncRNA 0.36 3 99022057 99022698

Neighbor

gene id symbol gene type direction distance location
LOC118944187 NA coding upstream 69266 98859346 ~ 98986848 (+)
LOC118943887 NA coding upstream 71678 98949476 ~ 98950379 (+)
LOC110510476 LOC106561728 coding upstream 77109 98897524 ~ 98944948 (+)
atp8b4 atp8b4 coding downstream 66976 99089674 ~ 99152115 (+)
cops2 cops2 coding downstream 143665 99166363 ~ 99180897 (+)
LOC110502545 cep152 coding downstream 166203 99188901 ~ 99207160 (+)
LOC110500866 cep152 coding downstream 185269 99207967 ~ 99210940 (+)
duox2 LOC106561732 coding downstream 560313 99581865 ~ 99597608 (+)
G210508 NA non-coding upstream 6781 99015052 ~ 99015276 (+)
G210492 NA non-coding upstream 41771 98979828 ~ 98980286 (+)
G210303 NA non-coding upstream 63886 98910173 ~ 98958171 (+)
G210480 NA non-coding upstream 80934 98877838 ~ 98941123 (+)
G210288 NA non-coding downstream 2300 99024998 ~ 99025499 (+)
G210776 NA non-coding downstream 70910 99093608 ~ 99093905 (+)
G210779 NA non-coding downstream 79205 99101903 ~ 99103010 (+)
G210780 NA non-coding downstream 81471 99104169 ~ 99104387 (+)
G210782 NA non-coding downstream 87422 99110120 ~ 99110567 (+)
G210484 NA other upstream 95651 98902788 ~ 98926406 (+)
G210408 NA other upstream 321665 98697168 ~ 98700392 (+)
G209759 NA other upstream 1064221 97957244 ~ 97958896 (+)
G209636 NA other upstream 1249292 97740061 ~ 97772765 (+)
G210823 LOC106561768 other downstream 214680 99237378 ~ 99238258 (+)
G210983 LOC106561766 other downstream 697481 99720179 ~ 99721983 (+)
LOC110502581 LOC106561777 other downstream 782470 99777695 ~ 99818794 (+)
LOC110500919 LOC106584740 other downstream 873921 99896619 ~ 99899881 (+)
G211779 NA other downstream 1436959 100459657 ~ 100461981 (+)

Expression


Co-expression Network