G211107



Basic Information


Item Value
gene id G211107
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 99095938 ~ 99096218 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU239309
TCCAGCATCCCCTCCGTGGTATTAACATCCACAACCATTTCTCCGCCATTTCTTTCCCCCGCTGTCATTCTTTGCAGGAACAAGGTCAGAAAATAGCCATTGTGAATAGGCCGATATTGACTCCAGATGTTCACTTTACAATGTCCCTGTTAAAACACAGCAGGTCCCGTTCTCATCCAGACGAACCGGGGACCTTCTGCCCAATATACACTGACGTACTCCACCCGTTTCGAGAAAAATACGTTTTAGTATCCACCACTGGTAGATGAGGTAATGTAGGT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU239309 True 281 lncRNA 0.53 1 99095938 99096218

Neighbor


gene id symbol gene type direction distance location
LOC110500795 LOC106561757 coding downstream 82561 98997411 ~ 99013377 (-)
ctdspl2a LOC106561755 coding downstream 99764 98974844 ~ 98996174 (-)
LOC110500849 LOC106561754 coding downstream 128640 98959028 ~ 98967298 (-)
LOC118944229 NA coding downstream 141699 98954131 ~ 98954239 (-)
LOC118944200 NA coding downstream 145817 98949908 ~ 98950121 (-)
galk2 galk2 coding upstream 58041 99154259 ~ 99166352 (-)
tjp1b tjp1 coding upstream 125632 99221850 ~ 99503455 (-)
duox LOC106584698 coding upstream 447571 99543789 ~ 99582886 (-)
LOC110500900 LOC106561773 coding upstream 504567 99600785 ~ 99615331 (-)
LOC118936886 NA coding upstream 519614 99615676 ~ 99619142 (-)
G211106 NA non-coding downstream 577 99095099 ~ 99095361 (-)
G210760 NA non-coding downstream 77496 99018147 ~ 99018442 (-)
G210757 NA non-coding downstream 78967 99016713 ~ 99016971 (-)
G210738 NA non-coding downstream 131829 98963751 ~ 98964109 (-)
G210730 NA non-coding downstream 140397 98932956 ~ 98955541 (-)
G211108 NA non-coding upstream 2892 99099110 ~ 99099313 (-)
G211114 NA non-coding upstream 12196 99108414 ~ 99108639 (-)
G211120 NA non-coding upstream 19631 99115849 ~ 99116078 (-)
G211121 NA non-coding upstream 19913 99116131 ~ 99116384 (-)
G211125 NA non-coding upstream 24781 99120999 ~ 99121208 (-)
G210765 NA other downstream 69820 99025732 ~ 99026118 (-)
LOC118943885 LOC106561728 other downstream 149869 98914015 ~ 98946069 (-)
LOC118943882 LOC106561728 other downstream 152141 98936783 ~ 98944041 (-)
LOC118936884 NA other downstream 950421 98127948 ~ 98145517 (-)
G209841 NA other downstream 1476726 97618859 ~ 97619212 (-)
G211127 NA other upstream 27015 99123233 ~ 99123658 (-)
LOC110502568 LOC106561766 other upstream 614483 99697219 ~ 99725327 (-)
G211402 NA other upstream 760095 99856313 ~ 99857855 (-)
G211447 myo5c other upstream 863339 99959557 ~ 99963474 (-)

Expression



Co-expression Network