G210791


Basic Information

Item Value
gene id G210791
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 99136097 ~ 99137652 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU238902
aaacttaggcatgacatgccagcaacaaacatggacaatacacatccaagtatagctgaccaaattatgaaagacaagctttgtaattttgaattccttAAAGTCAGTGTgaaagaggtgaaaaaattatgGATGTCTATTAACAATGACACAGGGGTCTGACacgtggatggaaaattactgaggataatagcggacgatattgccactcctatttgccatttATTCAATTTAAGCCTGCAGGAAAGTGTgttgccctcaggcctggagggaagcaaaagtaattcccctacctaagaatagtaaagcctccTTAACTGGCTCAAATAACCAACCAATCatcctgttaccaacccttagtacatttttggaaaacaaatgtgttgtgttctttaataatttaatttattattattattaataataaataatttagtctgctgctggaaaaaagtatgtgtcatggctttacaccccgtgctatattgtggataaagagttacctgtttAACagctttaatggaagcctctccaacaaaatccaggtagaatcaggaattccccagggcagctgtctaggccccttactttttaaaatctttactACCGACATGGCTTTGAggaaagccagtgtgtctatgtatgcggatgactcaacactatacacgtcagctaccacagcgaTTGAAATGAGAGCAACacttaaagagctgcagttagtttcagagtgggtggcaatgtaaagttagtcctaaatatttcaaaaactaaaatcattgtatttgggacaaatcattcactaaaccctaaacctcaactaaatcttgtaatgaataatgtggaaattgagcaagttgaggagactaaactgcttggagtaaacTGTCATAGACAAAACTATATtaaatattgatacaacagtatctaagatggggagaagtctatccataataaagtgctgctctgccttcttaacaacactatcaacaaggcagatcctacaggccctagtttctaccttcttaacagcactatcaacaaggcaggtcctacaggccctagtttctaccttcttaacaacactatcaacaaggcaggtcctacaggccctagtttctaccttcttaacaacactatcaacaaggcaggtcctacaggccctagtttctatcttcttaacaacactgtcaacaaggcaggtcctacaggccctagtttctaccttcttaacaacactgtcaacaaggcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU238902 True 1250 lncRNA 0.55 2 99136097 99137652

Neighbor

gene id symbol gene type direction distance location
LOC118944187 NA coding upstream 183306 98859346 ~ 98986848 (+)
LOC118943887 NA coding upstream 185718 98949476 ~ 98950379 (+)
LOC110510476 LOC106561728 coding upstream 191149 98897524 ~ 98944948 (+)
cops2 cops2 coding downstream 28711 99166363 ~ 99180897 (+)
LOC110502545 cep152 coding downstream 51249 99188901 ~ 99207160 (+)
LOC110500866 cep152 coding downstream 70315 99207967 ~ 99210940 (+)
duox2 LOC106561732 coding downstream 445359 99581865 ~ 99597608 (+)
LOC110502564 LOC106584732 coding downstream 499084 99636736 ~ 99678499 (+)
G210787 NA non-coding upstream 10031 99125802 ~ 99126066 (+)
G210786 NA non-coding upstream 13382 99122509 ~ 99122715 (+)
G210784 NA non-coding upstream 22610 99113259 ~ 99113487 (+)
G210782 NA non-coding upstream 25530 99110120 ~ 99110567 (+)
G210780 NA non-coding upstream 31710 99104169 ~ 99104387 (+)
G210792 NA non-coding downstream 226 99137878 ~ 99138518 (+)
G210793 NA non-coding downstream 1368 99139020 ~ 99139637 (+)
G210794 NA non-coding downstream 9612 99147264 ~ 99147627 (+)
G210795 NA non-coding downstream 11979 99149631 ~ 99149925 (+)
atp8b4 atp8b4 non-coding downstream 13140 99089674 ~ 99152115 (+)
G210484 NA other upstream 209691 98902788 ~ 98926406 (+)
G210408 NA other upstream 435705 98697168 ~ 98700392 (+)
G209759 NA other upstream 1178261 97957244 ~ 97958896 (+)
G209636 NA other upstream 1363332 97740061 ~ 97772765 (+)
G210823 LOC106561768 other downstream 99726 99237378 ~ 99238258 (+)
G210983 LOC106561766 other downstream 582527 99720179 ~ 99721983 (+)
LOC110502581 LOC106561777 other downstream 667516 99777695 ~ 99818794 (+)
LOC110500919 LOC106584740 other downstream 758967 99896619 ~ 99899881 (+)
G211779 NA other downstream 1322005 100459657 ~ 100461981 (+)

Expression


Co-expression Network