G210840


Basic Information

Item Value
gene id G210840
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 99287736 ~ 99288047 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU238967
CCCCGAaatcctccttctcccccctctacctccctccctcctctcaccttcaGTACTACGTCTCCCTCCTGTATGTTTCCGTCTCTGGCCGCCAGGCTCTCGGGGGAGATGTCCTTCACGAAGATGTGGCTGGCCAGGCGAAGGCCATATTCTGCTTACGGAAGTGAACGAACAGCAACAAAGATAGTGTTAGCATAGCATAGTATAGCATGCTAAAGCATGTTAGCATAGTATAGCATGCTAAAGCATGTTAGCATAGTATAGCATGCTAAAGCATGTTAGCATAGTATAGCATGCTATAGGATTTTAGCA

Function

NR:

description
PREDICTED: tight junction protein ZO-1-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU238967 True 312 lncRNA 0.42 1 99287736 99288047

Neighbor

gene id symbol gene type direction distance location
LOC110500866 cep152 coding upstream 76796 99207967 ~ 99210940 (+)
LOC110502545 cep152 coding upstream 80576 99188901 ~ 99207160 (+)
cops2 cops2 coding upstream 106839 99166363 ~ 99180897 (+)
atp8b4 atp8b4 coding upstream 135621 99089674 ~ 99152115 (+)
LOC118944187 NA coding upstream 334945 98859346 ~ 98986848 (+)
duox2 LOC106561732 coding downstream 294964 99581865 ~ 99597608 (+)
LOC110502564 LOC106584732 coding downstream 348689 99636736 ~ 99678499 (+)
LOC110502581 LOC106561777 coding downstream 489648 99777695 ~ 99818794 (+)
LOC110502588 LOC106584738 coding downstream 547571 99835618 ~ 99877214 (+)
LOC118943910 NA coding downstream 596107 99884154 ~ 99891769 (+)
G210820 NA non-coding upstream 492 99234125 ~ 99287244 (+)
G210828 LOC105906243 non-coding upstream 35343 99248126 ~ 99252393 (+)
G210814 NA non-coding upstream 63749 99221886 ~ 99223987 (+)
G210801 NA non-coding upstream 102031 99185356 ~ 99185705 (+)
G210800 NA non-coding upstream 102606 99184901 ~ 99185130 (+)
G210841 NA non-coding downstream 3027 99291074 ~ 99291385 (+)
G210842 NA non-coding downstream 3592 99291639 ~ 99291865 (+)
G210843 NA non-coding downstream 4057 99292104 ~ 99292572 (+)
G210844 NA non-coding downstream 9232 99297279 ~ 99297699 (+)
G210845 NA non-coding downstream 15077 99303124 ~ 99303569 (+)
G210823 LOC106561768 other upstream 49478 99237378 ~ 99238258 (+)
G210484 NA other upstream 361330 98902788 ~ 98926406 (+)
LOC110510476 LOC106561728 other upstream 388198 98897524 ~ 98944948 (+)
G210408 NA other upstream 587344 98697168 ~ 98700392 (+)
G209759 NA other upstream 1329900 97957244 ~ 97958896 (+)
G210983 LOC106561766 other downstream 432132 99720179 ~ 99721983 (+)
LOC110500919 LOC106584740 other downstream 608572 99896619 ~ 99899881 (+)
G211779 NA other downstream 1171610 100459657 ~ 100461981 (+)
G211809 LOC107574289 other downstream 1179631 100467678 ~ 100468157 (+)

Expression


Co-expression Network