XLOC_021505


Basic Information

Item Value
gene id XLOC_021505
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 11224124 ~ 11224605 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044786
TCGATTGCAGGGAAAATGGAAACATGCACATGAAAGCCATGCAAGTGCGTGTATGTCTTCAGTCTGCGCTCCACAAGCGGTAAAATGAGAGATGCTGACATCGCAGTCACTGAGATTTCGGGAAAACCATTTTGTCCAAGTCTTTGCTtccagaaaaagagagagaaagagaggggatGAAGAAAAGCGCAGGCTGTCGCGGGGTTTCGCCCTTTCTCCTTCGGTACTTCACCCCGGAATATAATCCAGTTTGGCTGCCTCTGGGAAACTGCGCTCAAAGGCAGACAGTCCTGCTCCTCCTGTGCCCAGTACACCTCGCCGGATTCACAGCCATTCACTGCGAGAGAGAGACGCTGTATGCGGCCAGATTTCCATTGAGCGTGTCCAGCCAGCTCAGGTCCAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044786 True 403 lncRNA 0.52 2 11224124 11224605

Neighbor

gene id symbol gene type direction distance location
XLOC_021504 ppp4r2a coding upstream 396705 10805188 ~ 10827419 (+)
XLOC_021503 BX323028.1 coding upstream 617578 10601324 ~ 10606546 (+)
XLOC_021502 tns2a coding upstream 636867 10469955 ~ 10587257 (+)
XLOC_021501 eif4ba coding upstream 771047 10396842 ~ 10453077 (+)
XLOC_021500 krt18a.2 coding upstream 868572 10352921 ~ 10355552 (+)
XLOC_021506 chl1a coding downstream 61057 11285662 ~ 11452312 (+)
XLOC_021507 cntn3a.1 coding downstream 444504 11669109 ~ 11861393 (+)
XLOC_021508 CR735125.1 coding downstream 710979 11935584 ~ 11935700 (+)
XLOC_021509 edn3b coding downstream 848375 12072980 ~ 12106839 (+)
XLOC_021510 AL929345.3 coding downstream 858952 12083557 ~ 12083671 (+)
XLOC_021497 NA non-coding upstream 1271298 9938245 ~ 9952826 (+)
XLOC_021495 NA non-coding upstream 1358186 9865701 ~ 9865938 (+)
XLOC_021494 CU466281.1 non-coding upstream 1496692 9727410 ~ 9727432 (+)
XLOC_021493 CR388392.1 non-coding upstream 1605789 9618213 ~ 9618335 (+)
XLOC_021514 NA non-coding downstream 1034931 12259536 ~ 12279048 (+)
XLOC_021518 NA non-coding downstream 1448798 12673403 ~ 12830266 (+)
XLOC_021519 NA non-coding downstream 1450322 12674927 ~ 12675421 (+)

Expression


Co-expression Network