Gene
RNA
| Item | Value |
|---|---|
| gene id | G210969 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 99620197 ~ 99620654 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU239115 | False | 377 | lncRNA | 0.48 | 2 | 99620197 | 99620654 |
| TU239117 | True | 203 | lncRNA | 0.44 | 2 | 99620197 | 99620654 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| duox2 | LOC106561732 | coding | upstream | 22589 | 99581865 ~ 99597608 (+) |
| LOC110500866 | cep152 | coding | upstream | 409257 | 99207967 ~ 99210940 (+) |
| LOC110502545 | cep152 | coding | upstream | 413037 | 99188901 ~ 99207160 (+) |
| cops2 | cops2 | coding | upstream | 439300 | 99166363 ~ 99180897 (+) |
| atp8b4 | atp8b4 | coding | upstream | 468082 | 99089674 ~ 99152115 (+) |
| LOC110502564 | LOC106584732 | coding | downstream | 16082 | 99636736 ~ 99678499 (+) |
| LOC110502581 | LOC106561777 | coding | downstream | 157041 | 99777695 ~ 99818794 (+) |
| LOC110502588 | LOC106584738 | coding | downstream | 214964 | 99835618 ~ 99877214 (+) |
| LOC118943910 | NA | coding | downstream | 263500 | 99884154 ~ 99891769 (+) |
| LOC110500919 | LOC106584740 | coding | downstream | 276568 | 99896619 ~ 99899881 (+) |
| G210966 | NA | non-coding | upstream | 4267 | 99615710 ~ 99615930 (+) |
| G210950 | NA | non-coding | upstream | 35253 | 99583777 ~ 99584944 (+) |
| G210942 | NA | non-coding | upstream | 47091 | 99572063 ~ 99573106 (+) |
| G210926 | NA | non-coding | upstream | 75885 | 99529677 ~ 99544312 (+) |
| G210972 | NA | non-coding | downstream | 10572 | 99631226 ~ 99632212 (+) |
| G210973 | NA | non-coding | downstream | 12507 | 99633161 ~ 99633450 (+) |
| G210976 | NA | non-coding | downstream | 22396 | 99643050 ~ 99643285 (+) |
| G210982 | NA | non-coding | downstream | 36120 | 99656774 ~ 99659478 (+) |
| G211057 | NA | non-coding | downstream | 224338 | 99844992 ~ 99849321 (+) |
| G210823 | LOC106561768 | other | upstream | 381939 | 99237378 ~ 99238258 (+) |
| G210484 | NA | other | upstream | 693791 | 98902788 ~ 98926406 (+) |
| LOC110510476 | LOC106561728 | other | upstream | 720659 | 98897524 ~ 98944948 (+) |
| G210408 | NA | other | upstream | 919805 | 98697168 ~ 98700392 (+) |
| G209759 | NA | other | upstream | 1662361 | 97957244 ~ 97958896 (+) |
| G210983 | LOC106561766 | other | downstream | 99525 | 99720179 ~ 99721983 (+) |
| G211779 | NA | other | downstream | 839003 | 100459657 ~ 100461981 (+) |
| G211809 | LOC107574289 | other | downstream | 847024 | 100467678 ~ 100468157 (+) |
