G210983 (LOC106561766)


Basic Information

Item Value
gene id G210983
gene name LOC106561766
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 99720179 ~ 99721983 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU239134
CTCTCTTTGACTCCTCCTCTGTGTGGTTGAGAGATCTGGATCTGCTCAGGGAGGTCTTCTCCACTCTGTACCGTACCTTCCCCGCTTTAGGTGACACAACTGTaggcccctcctccttctcccactGGAGCTTATTAAACACCAGAGTGGAGGGTCCGTTGGCCCCTCTCCCCTTAGGTGACCCGGGAGCGCTGGTGACTCCCCCTGGAGTCTCTCCCCTGGTCCCTCTGACGGCCGAGGCAGGGCTGGAGGGGTCCAATGGGTATGAGTGACACTGTCGCCTGCTGTCCACGCTGCGTGACCTCCTTCGGTCCTCTGGGGCTATCCTCCCTCTCCTAGGCCCAGCTCGGCCCATCTGCTGGGGGCTGTCGAACTGGTTGATAAGGCTACCTATGGAGGGGATGGGTTCTGTGTCCACTGCGTTTGGGGACCTCCTGGGGACGTTGGTAACCTCGCTTGGGGGACTTAGTAAGGTGGTAAAAGAATGGTGGTGGGGACCTGGGGCTGAGACAGGGCCCGGACCTTGGGTCTGGGTGGGAGCTGGGACAGGGCCCAGTCCTTGGGTCTGGGTGGGAGCTGGGACAGGGCCCAGGCCTTGGATCTGGGTGGGAGCTGGGACAGGGCCCAGGCCTTGGGTCTGGGTGGGAGCTGGGACAGGGGCAGGGCCCGGGCCTTGGGTCTGGGCGTTAGCTGGGACAGGGGCAGGGCCCGGGCCTTGGGTCTTGGTGGGAGCTCTCTCTATACCCTCAGCAGGCAGAGGGATCCTGGCTGGTCCGGGTCTAGACCCTGCTCCCTGGGTCAGGGCGGCTCCTGCTCCACTCTGGAGACCTCTGGTGAGATGTCCCGGCCTAGGTACAGAGGTTGTCTGAGTGGGGGGAACAGAGAGTCTTCGGCTGGAGGAGAGGCGGGGGCTGAGGCTGTTCCAGTCTGGGTTGTAGGGTTTCAGCAGCTCTGGGTGTCTCTGGAAGTTCAACCCGATATTAGATGTcggcatggtcctctgtaactgcTGTAAGTGTGAGTCCTGGAAGTCGAACATGGACACGGTGGACGCCAGCATCCTCTGTGATTCCCTACCCTCCCTAACCTCAGTCAGAGAACCTCCACGAGCATGGTTGGGAATACTGTGCTCCATATTCGGACTTCCTAACAGAGATCGTTCCATATAGGGACTTCCTACTGGAGATCGTTCCATATAGGGACTTCCTAACGGAGATCGTTCCATATAGGGACTTCCTACTGGAGATCGTTCCATATAGGGACTTCCTAACGGAGATCGCTCCATATAGGGACTTCCTAACGGAGATCGCTCCATATAGGGACTTCCTAGTGGAGATTGCCTATCATTCACCATGGAGGTGTAATCAGACTGGCTGTGGGCGTTGACAGACTCTTCCTGGTGGTCCCAGTTTCTACTGTAGCTCTCCAGGCCACCAGACGGCAGAGCTGCTCTACTATCCCCGTTGTTCAATACAACGTAAGGATGACCCTCAATCCCCTGGACTTGTATCCTCACCCCGAACGTGCTGCTGCTGTCGCCCTGAGGACGAGGACCGCCTCTGGGACCAGGTCCAGGCTGCTGCATGTTGTAGCCCTGTTGTATTCTACTGAAGTCTGGAGACGAGCCACTCGCTCCGTTTCTGTGAGACTCCATTTATGGGAGTCAACGTAGAGACAACGTTGAGACAACGTTGTGTGTAGGCTGGGTTCACACCAGTCCTGAATGAACAAGCGGACTTTCCCTCAGAACTGAAGAGATTCAC

Function

NR:

description
cingulin-like protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU239134 True 1763 TUCP 0.35 2 99720179 99721983

Neighbor

gene id symbol gene type direction distance location
LOC110502564 LOC106584732 coding upstream 41680 99636736 ~ 99678499 (+)
duox2 LOC106561732 coding upstream 122571 99581865 ~ 99597608 (+)
LOC110500866 cep152 coding upstream 509239 99207967 ~ 99210940 (+)
LOC110502545 cep152 coding upstream 513019 99188901 ~ 99207160 (+)
cops2 cops2 coding upstream 539282 99166363 ~ 99180897 (+)
LOC110502581 LOC106561777 coding downstream 55712 99777695 ~ 99818794 (+)
LOC110502588 LOC106584738 coding downstream 113635 99835618 ~ 99877214 (+)
LOC118943910 NA coding downstream 162171 99884154 ~ 99891769 (+)
LOC110500919 LOC106584740 coding downstream 175239 99896619 ~ 99899881 (+)
LOC110500932 LOC106561787 coding downstream 183657 99905640 ~ 99951756 (+)
G210982 NA non-coding upstream 60701 99656774 ~ 99659478 (+)
G210976 NA non-coding upstream 76894 99643050 ~ 99643285 (+)
G210973 NA non-coding upstream 86729 99633161 ~ 99633450 (+)
G210972 NA non-coding upstream 87967 99631226 ~ 99632212 (+)
G210969 NA non-coding upstream 99525 99620197 ~ 99620654 (+)
G211057 NA non-coding downstream 123009 99844992 ~ 99849321 (+)
G211054 NA non-coding downstream 155741 99877724 ~ 99878161 (+)
G211071 NA non-coding downstream 159816 99881799 ~ 99882331 (+)
G211077 NA non-coding downstream 182116 99904099 ~ 99904439 (+)
G210823 LOC106561768 other upstream 481921 99237378 ~ 99238258 (+)
G210484 NA other upstream 793773 98902788 ~ 98926406 (+)
LOC110510476 LOC106561728 other upstream 820641 98897524 ~ 98944948 (+)
G210408 NA other upstream 1019787 98697168 ~ 98700392 (+)
G209759 NA other upstream 1762343 97957244 ~ 97958896 (+)
G211779 NA other downstream 737674 100459657 ~ 100461981 (+)
G211809 LOC107574289 other downstream 745695 100467678 ~ 100468157 (+)
G212656 NA other downstream 1760428 101482181 ~ 101486796 (+)

Expression


Co-expression Network