Gene
RNA
| Item | Value |
|---|---|
| gene id | G211054 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 99877724 ~ 99878161 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU239237 | True | 410 | lncRNA | 0.42 | 2 | 99877724 | 99878161 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502588 | LOC106584738 | coding | upstream | 510 | 99835618 ~ 99877214 (+) |
| LOC110502581 | LOC106561777 | coding | upstream | 58930 | 99777695 ~ 99818794 (+) |
| LOC110502564 | LOC106584732 | coding | upstream | 199225 | 99636736 ~ 99678499 (+) |
| duox2 | LOC106561732 | coding | upstream | 280116 | 99581865 ~ 99597608 (+) |
| LOC110500866 | cep152 | coding | upstream | 666784 | 99207967 ~ 99210940 (+) |
| LOC118943910 | NA | coding | downstream | 5993 | 99884154 ~ 99891769 (+) |
| LOC110500919 | LOC106584740 | coding | downstream | 19061 | 99896619 ~ 99899881 (+) |
| LOC110500932 | LOC106561787 | coding | downstream | 27479 | 99905640 ~ 99951756 (+) |
| LOC110502593 | myo5c | coding | downstream | 75102 | 99953263 ~ 100008473 (+) |
| LOC110500941 | LOC106561786 | coding | downstream | 133592 | 100011753 ~ 100027473 (+) |
| G211057 | NA | non-coding | upstream | 28403 | 99844992 ~ 99849321 (+) |
| G210982 | NA | non-coding | upstream | 218246 | 99656774 ~ 99659478 (+) |
| G210976 | NA | non-coding | upstream | 234439 | 99643050 ~ 99643285 (+) |
| G210973 | NA | non-coding | upstream | 244274 | 99633161 ~ 99633450 (+) |
| G210972 | NA | non-coding | upstream | 245512 | 99631226 ~ 99632212 (+) |
| G211071 | NA | non-coding | downstream | 3638 | 99881799 ~ 99882331 (+) |
| G211077 | NA | non-coding | downstream | 25938 | 99904099 ~ 99904439 (+) |
| G211087 | NA | non-coding | downstream | 93914 | 99972075 ~ 99973929 (+) |
| G211098 | NA | non-coding | downstream | 115401 | 99993562 ~ 99994333 (+) |
| G210983 | LOC106561766 | other | upstream | 155741 | 99720179 ~ 99721983 (+) |
| G210823 | LOC106561768 | other | upstream | 639466 | 99237378 ~ 99238258 (+) |
| G210484 | NA | other | upstream | 951318 | 98902788 ~ 98926406 (+) |
| LOC110510476 | LOC106561728 | other | upstream | 978186 | 98897524 ~ 98944948 (+) |
| G211779 | NA | other | downstream | 581496 | 100459657 ~ 100461981 (+) |
| G211809 | LOC107574289 | other | downstream | 589517 | 100467678 ~ 100468157 (+) |
| G212656 | NA | other | downstream | 1604250 | 101482181 ~ 101486796 (+) |
| G212674 | NA | other | downstream | 1631599 | 101509760 ~ 101516104 (+) |
