Gene
RNA
| Item | Value |
|---|---|
| gene id | G211447 |
| gene name | myo5c |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 99959557 ~ 99963474 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| myo5c | Predicted to enable actin filament binding activity and microfilament motor activity. Predicted to be involved in actin filament organization and vesicle transport along actin filament. Predicted to be part of myosin complex. Predicted to be active in actin cytoskeleton; cytoplasm; and vesicle. Is expressed in intestine. Orthologous to human MYO5C (myosin VC). |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU239747 | True | 359 | TUCP | 0.48 | 3 | 99959557 | 99963474 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502573 | LOC106561753 | coding | downstream | 204667 | 99726157 ~ 99754890 (-) |
| LOC110502568 | LOC106561766 | coding | downstream | 234230 | 99697219 ~ 99725327 (-) |
| LOC118936886 | NA | coding | downstream | 340415 | 99615676 ~ 99619142 (-) |
| LOC110500900 | LOC106561773 | coding | downstream | 344226 | 99600785 ~ 99615331 (-) |
| duox | LOC106584698 | coding | downstream | 376671 | 99543789 ~ 99582886 (-) |
| LOC110500962 | LOC106561782 | coding | upstream | 140078 | 100103552 ~ 100113945 (-) |
| spi1a | LOC106592577 | coding | upstream | 151355 | 100114829 ~ 100126246 (-) |
| LOC110500995 | LOC106561801 | coding | upstream | 196459 | 100155072 ~ 100161971 (-) |
| ano3 | ano3 | coding | upstream | 256557 | 100220031 ~ 100340996 (-) |
| LOC118944188 | NA | coding | upstream | 388772 | 100352246 ~ 100352436 (-) |
| G211428 | NA | non-coding | downstream | 6188 | 99952908 ~ 99953369 (-) |
| G211427 | NA | non-coding | downstream | 7180 | 99951399 ~ 99952377 (-) |
| G211440 | LOC106561787 | non-coding | downstream | 23944 | 99934533 ~ 99935613 (-) |
| G211430 | NA | non-coding | downstream | 40636 | 99917536 ~ 99918921 (-) |
| G211409 | NA | non-coding | downstream | 89307 | 99868926 ~ 99870250 (-) |
| G211449 | LOC106561779 | non-coding | upstream | 4578 | 99968052 ~ 99968989 (-) |
| G211470 | NA | non-coding | upstream | 34631 | 99998105 ~ 99998470 (-) |
| G211594 | NA | non-coding | upstream | 57519 | 100020993 ~ 100021518 (-) |
| G211633 | NA | non-coding | upstream | 113209 | 100076683 ~ 100077772 (-) |
| G211634 | NA | non-coding | upstream | 115778 | 100079252 ~ 100080687 (-) |
| G211402 | NA | other | downstream | 101702 | 99856313 ~ 99857855 (-) |
| G211127 | NA | other | downstream | 835899 | 99123233 ~ 99123658 (-) |
| G210765 | NA | other | downstream | 933439 | 99025732 ~ 99026118 (-) |
| G211630 | LOC106584747 | other | upstream | 109773 | 100073247 ~ 100073797 (-) |
| G211904 | LOC100136012 | other | upstream | 491675 | 100455149 ~ 100455433 (-) |
| LOC110502607 | ano5 | other | upstream | 505792 | 100461545 ~ 100543552 (-) |
