G211630 (LOC106584747)


Basic Information

Item Value
gene id G211630
gene name LOC106584747
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 100073247 ~ 100073797 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU239998
GAGCGAATGGGATCTGGACAGCCAAAGACTTGGGCTAGACTAAACATGACAAACACATCCTTGATAATGACAATATGATGTCTAGTTTGTGCTAACCTTGTCCATGCTGAACAGGGCCTGGTACTGagtctactacaactactactactaaccTTGTCCATGCTGAACAGGGCCTGGTACCGAGTCTACTACTAACCTTGTCCATGCTGAACAGGGCCTGGTACTGGGGTATGACAGCGTTGCGTGGTTCAGTCAGGATACGGACCAGCGTCTCTTCATCCAGACTGTGTAGAGGCACCACCACAGGCAGACGCCCTACAAACTCCGGGATCATCCCAAACTCAATGAGGTCCCGGGCCTCCACGAGCTTCAGCAGCCggtccttctcctccatctctgccACCATGTCCGTCTGTTCACTACTGTTAGCTTTGTCGGCGGCCGCCGCCGCACGGCGACCCTTACCCATGTTGGATGGTGTGCCAAAGC

Function

NR:

description
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU239998 True 489 TUCP 0.54 2 100073247 100073797

Neighbor

gene id symbol gene type direction distance location
LOC110502573 LOC106561753 coding downstream 318357 99726157 ~ 99754890 (-)
LOC110502568 LOC106561766 coding downstream 347920 99697219 ~ 99725327 (-)
LOC118936886 NA coding downstream 454105 99615676 ~ 99619142 (-)
LOC110500900 LOC106561773 coding downstream 457916 99600785 ~ 99615331 (-)
duox LOC106584698 coding downstream 490361 99543789 ~ 99582886 (-)
LOC110500962 LOC106561782 coding upstream 29755 100103552 ~ 100113945 (-)
spi1a LOC106592577 coding upstream 41032 100114829 ~ 100126246 (-)
LOC110500995 LOC106561801 coding upstream 86136 100155072 ~ 100161971 (-)
ano3 ano3 coding upstream 146234 100220031 ~ 100340996 (-)
LOC118944188 NA coding upstream 278449 100352246 ~ 100352436 (-)
G211594 NA non-coding downstream 51729 100020993 ~ 100021518 (-)
G211470 NA non-coding downstream 74777 99998105 ~ 99998470 (-)
G211449 LOC106561779 non-coding downstream 104258 99968052 ~ 99968989 (-)
G211428 NA non-coding downstream 119878 99952908 ~ 99953369 (-)
G211427 NA non-coding downstream 120870 99951399 ~ 99952377 (-)
G211633 NA non-coding upstream 2886 100076683 ~ 100077772 (-)
G211634 NA non-coding upstream 5455 100079252 ~ 100080687 (-)
G211636 NA non-coding upstream 7560 100081357 ~ 100091112 (-)
G211647 NA non-coding upstream 52935 100126732 ~ 100127612 (-)
G211693 NA non-coding upstream 159779 100233576 ~ 100233986 (-)
G211447 myo5c other downstream 109773 99959557 ~ 99963474 (-)
G211402 NA other downstream 215392 99856313 ~ 99857855 (-)
G211127 NA other downstream 949589 99123233 ~ 99123658 (-)
G211904 LOC100136012 other upstream 381352 100455149 ~ 100455433 (-)
LOC110502607 ano5 other upstream 395469 100461545 ~ 100543552 (-)
pkp3a pkp3 other upstream 622909 100662972 ~ 100716213 (-)

Expression


Co-expression Network