Gene
RNA
| Item | Value |
|---|---|
| gene id | G211508 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 100090868 ~ 100091546 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: LIM domain-binding protein 3 isoform X2 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU239831 | True | 450 | lncRNA | 0.52 | 2 | 100090868 | 100091546 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502598 | LOC106584747 | coding | upstream | 12458 | 100051852 ~ 100078410 (+) |
| LOC110500952 | LOC106561785 | coding | upstream | 41347 | 100038199 ~ 100049521 (+) |
| LOC110500941 | LOC106561786 | coding | upstream | 63395 | 100011753 ~ 100027473 (+) |
| LOC110502593 | myo5c | coding | upstream | 82395 | 99953263 ~ 100008473 (+) |
| LOC110500932 | LOC106561787 | coding | upstream | 139167 | 99905640 ~ 99951756 (+) |
| LOC110500984 | LOC106584750 | coding | downstream | 41588 | 100133134 ~ 100140576 (+) |
| slc5a12 | slc5a12 | coding | downstream | 85646 | 100177192 ~ 100209223 (+) |
| LOC110501220 | NA | coding | downstream | 251004 | 100342550 ~ 100351946 (+) |
| LOC118936889 | NA | coding | downstream | 325528 | 100417074 ~ 100419174 (+) |
| LOC110501156 | LOC106567469 | coding | downstream | 346940 | 100438486 ~ 100444236 (+) |
| G211506 | NA | non-coding | upstream | 7499 | 100081365 ~ 100083369 (+) |
| G211482 | NA | non-coding | upstream | 10197 | 100079335 ~ 100080671 (+) |
| G211499 | NA | non-coding | upstream | 31441 | 100058397 ~ 100059427 (+) |
| G211492 | NA | non-coding | upstream | 57137 | 100032614 ~ 100033731 (+) |
| G211513 | NA | non-coding | downstream | 11543 | 100103089 ~ 100104233 (+) |
| G211519 | NA | non-coding | downstream | 23312 | 100114858 ~ 100126270 (+) |
| G211520 | NA | non-coding | downstream | 28819 | 100120365 ~ 100166474 (+) |
| G211524 | NA | non-coding | downstream | 38769 | 100130315 ~ 100131263 (+) |
| G211533 | NA | non-coding | downstream | 64139 | 100155685 ~ 100159487 (+) |
| LOC110500919 | LOC106584740 | other | upstream | 190991 | 99896619 ~ 99899881 (+) |
| LOC110502581 | LOC106561777 | other | upstream | 276493 | 99777695 ~ 99818794 (+) |
| G210983 | LOC106561766 | other | upstream | 368885 | 99720179 ~ 99721983 (+) |
| G210823 | LOC106561768 | other | upstream | 852610 | 99237378 ~ 99238258 (+) |
| G210484 | NA | other | upstream | 1164462 | 98902788 ~ 98926406 (+) |
| G211779 | NA | other | downstream | 368111 | 100459657 ~ 100461981 (+) |
| G211809 | LOC107574289 | other | downstream | 376132 | 100467678 ~ 100468157 (+) |
| G212656 | NA | other | downstream | 1390865 | 101482181 ~ 101486796 (+) |
| G212674 | NA | other | downstream | 1418214 | 101509760 ~ 101516104 (+) |
| G212690 | NA | other | downstream | 1462839 | 101554385 ~ 101561158 (+) |
