G211541


Basic Information

Item Value
gene id G211541
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 100172264 ~ 100172631 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU239878
GTGTTAGGCTGACTGGGAAGAACTACCTGAGCCAGTGTTAGGCTGATTGGGAAGAACTACCTGAGCCAGTGTTAGGCTGACTGGGAAGAACTACCTGAGCCAGTGTTAGGCTGATTGGGAAGAACTACCTGAGCCAGTGTTAGGCTGACTGGGAAGAACTACCTGAGCCAGTGTTAGGCTGATTTTGAGTCAATGTGTTATAATGTAAGAGGCCCTGATATACATTTTTCCCCTGTCATATTTGGATGCAAACCATCCCTCTTGTAAACTGGGGCATTGCCCAAAAGTGGTCAAAATTGTTAATGTACTCCAAATCCATTGGGGAGAAGTAGGATTTAAGCCGCTAGTGGAGCCAGAGGAGATGACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU239878 True 368 lncRNA 0.39 1 100172264 100172631

Neighbor

gene id symbol gene type direction distance location
LOC110500984 LOC106584750 coding upstream 31688 100133134 ~ 100140576 (+)
LOC110502598 LOC106584747 coding upstream 93854 100051852 ~ 100078410 (+)
LOC110500952 LOC106561785 coding upstream 122743 100038199 ~ 100049521 (+)
LOC110500941 LOC106561786 coding upstream 144791 100011753 ~ 100027473 (+)
LOC110502593 myo5c coding upstream 163791 99953263 ~ 100008473 (+)
slc5a12 slc5a12 coding downstream 4561 100177192 ~ 100209223 (+)
LOC110501220 NA coding downstream 169919 100342550 ~ 100351946 (+)
LOC118936889 NA coding downstream 244443 100417074 ~ 100419174 (+)
LOC110501156 LOC106567469 coding downstream 265855 100438486 ~ 100444236 (+)
sigirr sigirr coding downstream 465943 100638574 ~ 100655606 (+)
G211520 NA non-coding upstream 5790 100120365 ~ 100166474 (+)
G211532 NA non-coding upstream 11500 100160238 ~ 100160764 (+)
G211533 NA non-coding upstream 12777 100155685 ~ 100159487 (+)
G211524 NA non-coding upstream 41001 100130315 ~ 100131263 (+)
G211519 NA non-coding upstream 45994 100114858 ~ 100126270 (+)
G211546 NA non-coding downstream 9471 100182102 ~ 100220348 (+)
G211551 NA non-coding downstream 20692 100193323 ~ 100195665 (+)
G211545 NA non-coding downstream 37318 100209949 ~ 100211816 (+)
G211558 NA non-coding downstream 51425 100224056 ~ 100224330 (+)
LOC110500919 LOC106584740 other upstream 272387 99896619 ~ 99899881 (+)
LOC110502581 LOC106561777 other upstream 357889 99777695 ~ 99818794 (+)
G210983 LOC106561766 other upstream 450281 99720179 ~ 99721983 (+)
G210823 LOC106561768 other upstream 934006 99237378 ~ 99238258 (+)
G210484 NA other upstream 1245858 98902788 ~ 98926406 (+)
G211779 NA other downstream 287026 100459657 ~ 100461981 (+)
G211809 LOC107574289 other downstream 295047 100467678 ~ 100468157 (+)
G212656 NA other downstream 1309780 101482181 ~ 101486796 (+)
G212674 NA other downstream 1337129 101509760 ~ 101516104 (+)
G212690 NA other downstream 1381754 101554385 ~ 101561158 (+)

Expression


Co-expression Network