G211551


Basic Information

Item Value
gene id G211551
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 100193323 ~ 100195665 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU239905
cacctggaccctaccactctaccatcaaggtatagtactgtatagtctctgtcacctggaccctaccactctaccatcaaggtatagtactgtatagtctctgtcacctggaccctaccactctaccatcaaggtatagtactgtatagtctctgtcacctggaccctaccactctaccatcaaggtatagtactgtatagtctctaacctggaccctaccactctaccatcaaggtatagtactgtatagtctctgtcaccaggaccctaccactctaccatcaaggtatagtactgtat

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU239905 True 301 lncRNA 0.55 2 100193323 100195665

Neighbor

gene id symbol gene type direction distance location
LOC110500984 LOC106584750 coding upstream 52747 100133134 ~ 100140576 (+)
LOC110502598 LOC106584747 coding upstream 114913 100051852 ~ 100078410 (+)
LOC110500952 LOC106561785 coding upstream 143802 100038199 ~ 100049521 (+)
LOC110500941 LOC106561786 coding upstream 165850 100011753 ~ 100027473 (+)
LOC110502593 myo5c coding upstream 184850 99953263 ~ 100008473 (+)
LOC110501220 NA coding downstream 146885 100342550 ~ 100351946 (+)
LOC118936889 NA coding downstream 221409 100417074 ~ 100419174 (+)
LOC110501156 LOC106567469 coding downstream 242821 100438486 ~ 100444236 (+)
sigirr sigirr coding downstream 442909 100638574 ~ 100655606 (+)
LOC110502612 LOC106584763 coding downstream 589866 100785531 ~ 100848341 (+)
G211541 NA non-coding upstream 20692 100172264 ~ 100172631 (+)
G211520 NA non-coding upstream 26849 100120365 ~ 100166474 (+)
slc5a12 slc5a12 non-coding downstream 10676 100177192 ~ 100209223 (+)
G211545 NA non-coding downstream 14284 100209949 ~ 100211816 (+)
G211558 NA non-coding downstream 28391 100224056 ~ 100224330 (+)
G211562 NA non-coding downstream 33459 100229124 ~ 100229337 (+)
G211563 NA non-coding downstream 54500 100250165 ~ 100250370 (+)
LOC110500919 LOC106584740 other upstream 293446 99896619 ~ 99899881 (+)
LOC110502581 LOC106561777 other upstream 378948 99777695 ~ 99818794 (+)
G210983 LOC106561766 other upstream 471340 99720179 ~ 99721983 (+)
G210823 LOC106561768 other upstream 955065 99237378 ~ 99238258 (+)
G210484 NA other upstream 1266917 98902788 ~ 98926406 (+)
G211779 NA other downstream 263992 100459657 ~ 100461981 (+)
G211809 LOC107574289 other downstream 272013 100467678 ~ 100468157 (+)
G212656 NA other downstream 1286746 101482181 ~ 101486796 (+)
G212674 NA other downstream 1314095 101509760 ~ 101516104 (+)
G212690 NA other downstream 1358720 101554385 ~ 101561158 (+)

Expression


Co-expression Network