G211545


Basic Information

Item Value
gene id G211545
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 100209949 ~ 100211816 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU239893
TATTTTTAAGTCTTCATATTTAGGCATGTTTTTCCACGTATACAGGGATGAAGTGATAACAGTGTTCAGTGTTGCTGCACCTCATGTTAGAACAATTGATGACATGGAAAAGATAGTAAATCCAAGGTCTACTGGGCCTCCTCCTCAGGGGCGGTCTCAGGGACACACATTAAGACTAATCCTGAACTTTTTAATGGTGACTCCATTGATCTTTGCTTTTTTGGTCCAGAACTAAGCTTCacctgtgtctgggaaaccgtccccaaaaaataaaatcaaatctaatttaatttgtcacatacgcatggttagcagatgttattggtcacgtacacatggttagcagatgttaatgcgagtgtagtgaaatgcttgtgcttctagttccgacaatgcagtaatatccaacgagtaatctaacctaaaaattccacaacaactaccttatgcacacaagtgtaaaggaatgaataagaatatgtacataaagatatatgaatgagtgatggtacagaacggcataggcaagatgcagtggatggtatcgagtacagtatatacatatgagatgagtaatgtagggtatgtaaacatatgaaagtggctagtgatacatgtactacataaagatggcaagatgcagtagatggtatagagtacagtatatacatatgagatgagtaatgtagggtatgtaaacatatgaaagtggctagtgatacatgtactacataaagatggcaagatgcagtagatggtatcgagtacagtatatacatatgagatgagtaatgtagggtatgtaaacaagatgcagtagatggtatagagtacagtatatacatatgagatgagtaatgtagggtatgtaaacaaggtgcagtagatggtatagagtacagtatatacatatgagatgagtaatgtagggtatgtaaacaaggtgcagtagatggtatagagtacagtatatacatatgagatgagtaatgtaataATAGCAAGAGATTCAACTAAAACCGTTCTAATTTCCATTACCCACCTCGTTCATTTGATATTTTTTCATTCATCCTTTTTAACCTCTTGAGTCCCAAAACAATATAAACAAAACAATATTTCCAGCCAGATTACAGTCTTCAAACTTCAAACAAGGAAGATTTTGCTGCGTCCGTCCTAGAAACACGACTTGAGCTTTTTGTTTTTTAATACGTTGTCATTAAAGCCTTTCTTCAAAACGTCTTGGGAAGAAATATTATCAATCGGTACTTCAATCAACAATCTATTATCTCGACTGATTAACAATCATGACGAAATAAGATAACTATTTTCTTTTGACAGAATAGAGACACATTGCTTTCCAAGACTTGTTGATTTAACACAGGTAAACTCTGGCTAATAGCAGTCATGCATAGATTTCCAATGACCAATCACATCGAAGGGGAAGATGTTTTCTGACCAATCACATCGAAGGGGAAGATATTTTCTGACCAATCACATCGAAGGGGAAGATATTTTCTGACCAACCACATCAAAGGGAAGAACATTCAGAGGACACGGTTTACATTCATAGAAATATGATTACTAGAACAGGAAAAGCCCATCACAACACGGAGGATTGAAAGGGAAAGTCCGTTCTattgattctatttctatggttacaTTGCCTTGATTGCAGGTACAGAGACGTGAACGTCATGCTGATCGATTGCATTCAGAATCGCTACAAAAATATTACACACAATCAtaaataatacatttgaaaagtATATACATAGGAAAAAGTTAAACAGTTTTATAGAAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU239893 True 1802 lncRNA 0.35 2 100209949 100211816

Neighbor

gene id symbol gene type direction distance location
slc5a12 slc5a12 coding upstream 726 100177192 ~ 100209223 (+)
LOC110500984 LOC106584750 coding upstream 69373 100133134 ~ 100140576 (+)
LOC110502598 LOC106584747 coding upstream 131539 100051852 ~ 100078410 (+)
LOC110500952 LOC106561785 coding upstream 160428 100038199 ~ 100049521 (+)
LOC110500941 LOC106561786 coding upstream 182476 100011753 ~ 100027473 (+)
LOC110501220 NA coding downstream 130734 100342550 ~ 100351946 (+)
LOC118936889 NA coding downstream 205258 100417074 ~ 100419174 (+)
LOC110501156 LOC106567469 coding downstream 226670 100438486 ~ 100444236 (+)
sigirr sigirr coding downstream 426758 100638574 ~ 100655606 (+)
LOC110502612 LOC106584763 coding downstream 573715 100785531 ~ 100848341 (+)
G211551 NA non-coding upstream 14284 100193323 ~ 100195665 (+)
G211541 NA non-coding upstream 37318 100172264 ~ 100172631 (+)
G211532 NA non-coding upstream 49185 100160238 ~ 100160764 (+)
G211533 NA non-coding upstream 50462 100155685 ~ 100159487 (+)
G211558 NA non-coding downstream 12240 100224056 ~ 100224330 (+)
G211562 NA non-coding downstream 17308 100229124 ~ 100229337 (+)
G211563 NA non-coding downstream 38349 100250165 ~ 100250370 (+)
G211564 NA non-coding downstream 39407 100251223 ~ 100251441 (+)
G211573 NA non-coding downstream 98706 100310522 ~ 100311949 (+)
LOC110500919 LOC106584740 other upstream 310072 99896619 ~ 99899881 (+)
LOC110502581 LOC106561777 other upstream 395574 99777695 ~ 99818794 (+)
G210983 LOC106561766 other upstream 487966 99720179 ~ 99721983 (+)
G210823 LOC106561768 other upstream 971691 99237378 ~ 99238258 (+)
G210484 NA other upstream 1283543 98902788 ~ 98926406 (+)
G211779 NA other downstream 247841 100459657 ~ 100461981 (+)
G211809 LOC107574289 other downstream 255862 100467678 ~ 100468157 (+)
G212656 NA other downstream 1270595 101482181 ~ 101486796 (+)
G212674 NA other downstream 1297944 101509760 ~ 101516104 (+)
G212690 NA other downstream 1342569 101554385 ~ 101561158 (+)

Expression


Co-expression Network