G211573


Basic Information

Item Value
gene id G211573
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 100310522 ~ 100311949 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU239929
ATAGATCAATAGAGAGACTTATAAACCAACAGATCACAACAGAGACTTATAAACCAACAGAGACTTATAAACCAACAGAGACTTATAAACCAACAGATCAATAGAGAGACTTATAAACCAATAGAGACTTATAAACCAACAGAGACTTATAAACCAACAGAGACTTATAAACCAACAGAGACTTATAAACCAACAGAGACTTATAAACCAACAGA
>TU239930
ATAGATCAATAGAGAGACTTATAAACCAACAGATCACAACAGAGACTTATAAACCAACAGAGACTTATAAACCAACAGAGACTTATAAACCAACAGATCAATAGAGAGACTTATAAACCAATAGAGACTTATAAACCAACAGAGACTTATAAACCAACAGATCAATAGAGAGACTTATAAACCAACAGAGACTTATAAACCAACAGAGACTTATAAACCAACAGAGACTTATAAACCAATAGAGACTTATAAACCAACAGATCAATAGAGAGACTTATAAACCAATAGAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106613132

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU239929 False 215 lncRNA 0.33 2 100310522 100311422
TU239930 True 290 lncRNA 0.32 3 100310522 100311949

Neighbor

gene id symbol gene type direction distance location
slc5a12 slc5a12 coding upstream 101299 100177192 ~ 100209223 (+)
LOC110500984 LOC106584750 coding upstream 169946 100133134 ~ 100140576 (+)
LOC110502598 LOC106584747 coding upstream 232112 100051852 ~ 100078410 (+)
LOC110500952 LOC106561785 coding upstream 261001 100038199 ~ 100049521 (+)
LOC110500941 LOC106561786 coding upstream 283049 100011753 ~ 100027473 (+)
LOC110501220 NA coding downstream 30601 100342550 ~ 100351946 (+)
LOC118936889 NA coding downstream 105125 100417074 ~ 100419174 (+)
LOC110501156 LOC106567469 coding downstream 126537 100438486 ~ 100444236 (+)
sigirr sigirr coding downstream 326625 100638574 ~ 100655606 (+)
LOC110502612 LOC106584763 coding downstream 473582 100785531 ~ 100848341 (+)
G211564 NA non-coding upstream 59081 100251223 ~ 100251441 (+)
G211563 NA non-coding upstream 60152 100250165 ~ 100250370 (+)
G211562 NA non-coding upstream 81185 100229124 ~ 100229337 (+)
G211558 NA non-coding upstream 86192 100224056 ~ 100224330 (+)
G211545 NA non-coding upstream 98706 100209949 ~ 100211816 (+)
G211578 NA non-coding downstream 13296 100325245 ~ 100325482 (+)
G211582 NA non-coding downstream 21579 100333528 ~ 100333890 (+)
G211736 NA non-coding downstream 46111 100358060 ~ 100365828 (+)
G211766 NA non-coding downstream 60471 100372420 ~ 100374476 (+)
LOC110500919 LOC106584740 other upstream 410645 99896619 ~ 99899881 (+)
LOC110502581 LOC106561777 other upstream 496147 99777695 ~ 99818794 (+)
G210983 LOC106561766 other upstream 588539 99720179 ~ 99721983 (+)
G210823 LOC106561768 other upstream 1072264 99237378 ~ 99238258 (+)
G210484 NA other upstream 1384116 98902788 ~ 98926406 (+)
G211779 NA other downstream 147708 100459657 ~ 100461981 (+)
G211809 LOC107574289 other downstream 155729 100467678 ~ 100468157 (+)
G212656 NA other downstream 1170462 101482181 ~ 101486796 (+)
G212674 NA other downstream 1197811 101509760 ~ 101516104 (+)
G212690 NA other downstream 1242436 101554385 ~ 101561158 (+)

Expression


Co-expression Network