G211736


Basic Information

Item Value
gene id G211736
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 100358060 ~ 100365828 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU240174
GAaaggccctggagtgggccaacggtCTTCCCTTGTTCGGCCTCTCATGATCCTAttatttcgtggcaacagagggctctcaaggaATGATCCTGTCAGTGTTCAGTGAGGTGTGTAGGTGTTTCCTTAGGTGCCACTACGGTGGAAAGTTCTAACCAGGTTTCCACCATGCACATtcccccccgaatatgccgatttggcactcaccatctgtaaaaagaaggcgactcaattaccaccccat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU240174 True 244 lncRNA 0.51 2 100358060 100365828

Neighbor

gene id symbol gene type direction distance location
LOC110501220 NA coding upstream 6114 100342550 ~ 100351946 (+)
slc5a12 slc5a12 coding upstream 148837 100177192 ~ 100209223 (+)
LOC110500984 LOC106584750 coding upstream 217484 100133134 ~ 100140576 (+)
LOC110502598 LOC106584747 coding upstream 279650 100051852 ~ 100078410 (+)
LOC110500952 LOC106561785 coding upstream 308539 100038199 ~ 100049521 (+)
LOC118936889 NA coding downstream 51246 100417074 ~ 100419174 (+)
LOC110501156 LOC106567469 coding downstream 72658 100438486 ~ 100444236 (+)
sigirr sigirr coding downstream 272746 100638574 ~ 100655606 (+)
LOC110502612 LOC106584763 coding downstream 419703 100785531 ~ 100848341 (+)
LOC118936893 NA coding downstream 482346 100848174 ~ 100860603 (+)
G211582 NA non-coding upstream 24170 100333528 ~ 100333890 (+)
G211578 NA non-coding upstream 32578 100325245 ~ 100325482 (+)
G211573 NA non-coding upstream 46111 100310522 ~ 100311949 (+)
G211564 NA non-coding upstream 106619 100251223 ~ 100251441 (+)
G211766 NA non-coding downstream 6592 100372420 ~ 100374476 (+)
G211768 NA non-coding downstream 15991 100381819 ~ 100382069 (+)
G211796 NA non-coding downstream 80917 100446745 ~ 100446946 (+)
G211797 NA non-coding downstream 81283 100447111 ~ 100447429 (+)
G211801 NA non-coding downstream 88808 100454636 ~ 100454836 (+)
LOC110500919 LOC106584740 other upstream 458183 99896619 ~ 99899881 (+)
LOC110502581 LOC106561777 other upstream 543685 99777695 ~ 99818794 (+)
G210983 LOC106561766 other upstream 636077 99720179 ~ 99721983 (+)
G210823 LOC106561768 other upstream 1119802 99237378 ~ 99238258 (+)
G210484 NA other upstream 1431654 98902788 ~ 98926406 (+)
G211779 NA other downstream 93829 100459657 ~ 100461981 (+)
G211809 LOC107574289 other downstream 101850 100467678 ~ 100468157 (+)
G212656 NA other downstream 1116583 101482181 ~ 101486796 (+)
G212674 NA other downstream 1143932 101509760 ~ 101516104 (+)
G212690 NA other downstream 1188557 101554385 ~ 101561158 (+)

Expression


Co-expression Network