G211801


Basic Information

Item Value
gene id G211801
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 100454636 ~ 100454836 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU240270
gcagcagggattttggcccactcctccatacagaccttctccagatccttcaggttttggggctgtcgctgggcaatacggactttcagctccctccaaagattttctattgggttcaggtctggagactggctaggccactccaggaccttgagatgcttcttacggagccactccttagttgccctggctgtgtgtttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU240270 True 201 lncRNA 0.38 1 100454636 100454836

Neighbor

gene id symbol gene type direction distance location
LOC110501156 LOC106567469 coding upstream 10400 100438486 ~ 100444236 (+)
LOC118936889 NA coding upstream 35462 100417074 ~ 100419174 (+)
LOC110501220 NA coding upstream 102690 100342550 ~ 100351946 (+)
slc5a12 slc5a12 coding upstream 245413 100177192 ~ 100209223 (+)
LOC110500984 LOC106584750 coding upstream 314060 100133134 ~ 100140576 (+)
sigirr sigirr coding downstream 183738 100638574 ~ 100655606 (+)
LOC110502612 LOC106584763 coding downstream 330695 100785531 ~ 100848341 (+)
LOC118936893 NA coding downstream 393338 100848174 ~ 100860603 (+)
LOC110501031 LOC106592222 coding downstream 474532 100929368 ~ 100964786 (+)
best1 LOC102229874 coding downstream 890449 101345285 ~ 101371174 (+)
G211797 NA non-coding upstream 7207 100447111 ~ 100447429 (+)
G211796 NA non-coding upstream 7690 100446745 ~ 100446946 (+)
G211768 NA non-coding upstream 72567 100381819 ~ 100382069 (+)
G211766 NA non-coding upstream 80160 100372420 ~ 100374476 (+)
G211736 NA non-coding upstream 88808 100358060 ~ 100365828 (+)
G211804 NA non-coding downstream 7164 100462000 ~ 100462554 (+)
G211805 NA non-coding downstream 8113 100462949 ~ 100464466 (+)
G211806 NA non-coding downstream 9962 100464798 ~ 100465004 (+)
G211807 NA non-coding downstream 10469 100465305 ~ 100465644 (+)
G211808 NA non-coding downstream 11238 100466074 ~ 100466416 (+)
LOC110500919 LOC106584740 other upstream 554759 99896619 ~ 99899881 (+)
LOC110502581 LOC106561777 other upstream 640261 99777695 ~ 99818794 (+)
G210983 LOC106561766 other upstream 732653 99720179 ~ 99721983 (+)
G210823 LOC106561768 other upstream 1216378 99237378 ~ 99238258 (+)
G210484 NA other upstream 1528230 98902788 ~ 98926406 (+)
G211779 NA other downstream 4821 100459657 ~ 100461981 (+)
G211809 LOC107574289 other downstream 12842 100467678 ~ 100468157 (+)
G212656 NA other downstream 1027575 101482181 ~ 101486796 (+)
G212674 NA other downstream 1054924 101509760 ~ 101516104 (+)
G212690 NA other downstream 1099549 101554385 ~ 101561158 (+)

Expression


Co-expression Network