G211809 (LOC107574289)


Basic Information

Item Value
gene id G211809
gene name LOC107574289
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 100467678 ~ 100468157 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU240278
gccATACTCACGTTGGTGACGACAGACAGGACGGCCACCCCGTTGAGTATTTCCTGCCAGGCACCGATGCTGTGGGCTTTAGATGCTACGGGCCGGCGGAACTGGGTGGTGAACTTCCAGGCGTCCACTCTGACTTCTATGATGTTGTTCAACAGCGCCAGCAGGGGGGCCAGAGGGAAGGAGGCCACGAACAGAGTGATGAAACCAAACTGGAtcactgtggaggagaggagtggagaggggtggagaggagaggggatgggaaagtggagaggagaggggagggatggagaggggaggggaaaatggagaagaaaggagagaaagtggagagaagaagagagagactaTGATGGTAAATTAGATGGAAACAGCACCCTCTGCAGGAGAGCAGGAAGTAATGCAATGGGTATCTATATGAACGTCTTTGTGGACAGACTACGTAACATAAATGGGTATCGAGCATCTGACCAAATTAAG

Function

NR:

description
anoctamin-5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU240278 True 480 TUCP 0.53 1 100467678 100468157

Neighbor

gene id symbol gene type direction distance location
LOC110501156 LOC106567469 coding upstream 23442 100438486 ~ 100444236 (+)
LOC118936889 NA coding upstream 48504 100417074 ~ 100419174 (+)
LOC110501220 NA coding upstream 115732 100342550 ~ 100351946 (+)
slc5a12 slc5a12 coding upstream 258455 100177192 ~ 100209223 (+)
LOC110500984 LOC106584750 coding upstream 327102 100133134 ~ 100140576 (+)
sigirr sigirr coding downstream 170417 100638574 ~ 100655606 (+)
LOC110502612 LOC106584763 coding downstream 317374 100785531 ~ 100848341 (+)
LOC118936893 NA coding downstream 380017 100848174 ~ 100860603 (+)
LOC110501031 LOC106592222 coding downstream 461211 100929368 ~ 100964786 (+)
best1 LOC102229874 coding downstream 877128 101345285 ~ 101371174 (+)
G211808 NA non-coding upstream 1262 100466074 ~ 100466416 (+)
G211807 NA non-coding upstream 2034 100465305 ~ 100465644 (+)
G211806 NA non-coding upstream 2674 100464798 ~ 100465004 (+)
G211805 NA non-coding upstream 3212 100462949 ~ 100464466 (+)
G211804 NA non-coding upstream 5124 100462000 ~ 100462554 (+)
G211810 NA non-coding downstream 255 100468412 ~ 100468925 (+)
G211815 NA non-coding downstream 10899 100479056 ~ 100479743 (+)
G211818 NA non-coding downstream 16578 100484735 ~ 100485036 (+)
G211833 NA non-coding downstream 37391 100505548 ~ 100505858 (+)
G211844 NA non-coding downstream 66005 100534162 ~ 100536464 (+)
G211779 NA other upstream 5697 100459657 ~ 100461981 (+)
LOC110500919 LOC106584740 other upstream 567801 99896619 ~ 99899881 (+)
LOC110502581 LOC106561777 other upstream 653303 99777695 ~ 99818794 (+)
G210983 LOC106561766 other upstream 745695 99720179 ~ 99721983 (+)
G210823 LOC106561768 other upstream 1229420 99237378 ~ 99238258 (+)
G212656 NA other downstream 1014254 101482181 ~ 101486796 (+)
G212674 NA other downstream 1041603 101509760 ~ 101516104 (+)
G212690 NA other downstream 1086228 101554385 ~ 101561158 (+)
G212863 NA other downstream 1274742 101742899 ~ 101745974 (+)
G213051 NA other downstream 1709252 102177409 ~ 102177918 (+)

Expression


Co-expression Network