G211863


Basic Information

Item Value
gene id G211863
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 100621406 ~ 100629154 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU240346
accctgggagtgaccacactctctgagggtgtctcagggggagttgggataatgactgaccctgggagtgaccccactctctgagggtgtctcaggtggagttgggataatgactgaccctgggagtgaccccactctctgagggtgtctcagggggagttgggataatgacggaccctgggagtgaccccactctctgagggtgtctcagagggagttgggataatgactgaccctgggagtgaccacactctctgagggtgtctcagggggagttgggataatgactgaccctgggagtgacctcactctctgagggtgtctcagggagagttgggataatgactgaccctgggagtgaccccactctctgagggtgtctcagggggagttggaataatgactgaccctgggagtgaccccactctctgagggtgtctcagggagagttgggataatgactgaccctgggagtgaccccactctctgaggg
>TU240347
accctgggagtgaccacactctctgagggtgtctcagggggagttgggataatgactgaccctgggagtgaccccactctctgagggtgtctcaggtggagttgggataatgactgaccctgggagtgaccccactctctgagggtttctcagggggagttgggataatgactgaccctgggagtgaccacactctctgagggtgtctcagggagagttgggataatgactgaccatgggagtgaccccactctctgagggtgtctcagggggagttgggataatgactgaccctgggagtgaccccactctctgagggtgtctcagggggagttgggataatgactgaccctgggagtgacccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU240346 False 493 lncRNA 0.58 2 100621406 100629154
TU240347 True 365 lncRNA 0.58 2 100621406 100622117

Neighbor

gene id symbol gene type direction distance location
LOC110501156 LOC106567469 coding upstream 177170 100438486 ~ 100444236 (+)
LOC118936889 NA coding upstream 202232 100417074 ~ 100419174 (+)
LOC110501220 NA coding upstream 269460 100342550 ~ 100351946 (+)
slc5a12 slc5a12 coding upstream 412183 100177192 ~ 100209223 (+)
LOC110500984 LOC106584750 coding upstream 480830 100133134 ~ 100140576 (+)
sigirr sigirr coding downstream 9420 100638574 ~ 100655606 (+)
LOC110502612 LOC106584763 coding downstream 156377 100785531 ~ 100848341 (+)
LOC118936893 NA coding downstream 219020 100848174 ~ 100860603 (+)
LOC110501031 LOC106592222 coding downstream 300214 100929368 ~ 100964786 (+)
best1 LOC102229874 coding downstream 716131 101345285 ~ 101371174 (+)
G211862 NA non-coding upstream 1202 100618772 ~ 100620204 (+)
G211859 NA non-coding upstream 3722 100596314 ~ 100617684 (+)
G211856 NA non-coding upstream 40484 100580696 ~ 100580922 (+)
G211855 NA non-coding upstream 47237 100573905 ~ 100574169 (+)
G211849 NA non-coding upstream 77736 100543322 ~ 100543670 (+)
G211865 NA non-coding downstream 8218 100637372 ~ 100637676 (+)
G211832 NA non-coding downstream 9355 100638509 ~ 100656961 (+)
G211866 NA non-coding downstream 10668 100639822 ~ 100641339 (+)
G211974 NA non-coding downstream 33597 100662751 ~ 100662967 (+)
G212009 NA non-coding downstream 98247 100727401 ~ 100729565 (+)
G211809 LOC107574289 other upstream 153249 100467678 ~ 100468157 (+)
G211779 NA other upstream 159425 100459657 ~ 100461981 (+)
LOC110500919 LOC106584740 other upstream 721529 99896619 ~ 99899881 (+)
LOC110502581 LOC106561777 other upstream 807031 99777695 ~ 99818794 (+)
G210983 LOC106561766 other upstream 899423 99720179 ~ 99721983 (+)
G212656 NA other downstream 853257 101482181 ~ 101486796 (+)
G212674 NA other downstream 880606 101509760 ~ 101516104 (+)
G212690 NA other downstream 925231 101554385 ~ 101561158 (+)
G212863 NA other downstream 1113745 101742899 ~ 101745974 (+)
G213051 NA other downstream 1548255 102177409 ~ 102177918 (+)

Expression


Co-expression Network