G211832


Basic Information

Item Value
gene id G211832
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 100638509 ~ 100656961 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU240305
ggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggtgcaactcaatatcaaggagatgttttgtacactcagtgtgtaaaATTTGATTCCAATGATCATTTCACTGAAATGTTTTGAATGACCTTGGTAGTTACACTACATGTTATTATATGAAATTTGTAATAGATacctgttatgtgaactgtatgtGGAAAAATAGAAGAAGTGGTTGAGTGGTCTACTGCAGTAGTCTGGGATTTTGTTTTTACGTTAAAGTGGAAATGCATTCATTCTAATTTCGTAATGTTTGTTTAGAATTATGTTCAATAGAAATATTTATCGATCAAAGCTACCCTTTCTGTAGTTTAGGGCAGTTTACTAGTCCAGACCTTTTTCATAGGTAACTCATCTTGGACGAGCCTTGGCTTGTACGAACCAATCTCATGTTtcttttttgtaggggttgatacaatTTTCCTTAAAGtcagacattttaaagtggaaattccAAACTTTAGAAGCATTTTTAAAACCTTGaacacactacaagtttgcattttctTCTTGGTGTACAAGTATACCTCCTGGACTGGACGCTATTCTATTGCCCAGTGTTACCCCGAATCTGTCTCATAAATGCTGAATGCCAAGCAGAGTCGCACGTGATCTTTGGTATGACTCGGCCGGAAGAATAAACTCCCAGTGTTCCAATCTCAGGGCGGACACCCGAACCACATGGCCACTGATATGTTCTTTTTTTTAACTGTTTAGTGCTTTCTTCAGATATTACTTTCCCTCACCAGCAGAGGGCAGAGTTGAGtcgacttggggggggggggaaatcttTCTTATCATAACAATAATCTCATTCCCTAGGGGTTATTTGTTTATTGGGATCCCCATTAACTCTTCTtggggtccacaaaaaaacacaaaacatcacAAGTAACAAagcactgatacactgatagacaaggacagtcacacaaatgtaaaatacaatgaTAAACAAAC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU240305 True 1034 lncRNA 0.42 2 100638509 100656961

Neighbor

gene id symbol gene type direction distance location
LOC110501156 LOC106567469 coding upstream 194273 100438486 ~ 100444236 (+)
LOC118936889 NA coding upstream 219335 100417074 ~ 100419174 (+)
LOC110501220 NA coding upstream 286563 100342550 ~ 100351946 (+)
slc5a12 slc5a12 coding upstream 429286 100177192 ~ 100209223 (+)
LOC110500984 LOC106584750 coding upstream 497933 100133134 ~ 100140576 (+)
LOC110502612 LOC106584763 coding downstream 128570 100785531 ~ 100848341 (+)
LOC118936893 NA coding downstream 191213 100848174 ~ 100860603 (+)
LOC110501031 LOC106592222 coding downstream 272407 100929368 ~ 100964786 (+)
best1 LOC102229874 coding downstream 688324 101345285 ~ 101371174 (+)
LOC110516669 LOC106590745 coding downstream 977669 101634630 ~ 101695484 (+)
G211865 NA non-coding upstream 833 100637372 ~ 100637676 (+)
G211861 NA non-coding upstream 5458 100620844 ~ 100633051 (+)
G211863 NA non-coding upstream 9355 100621406 ~ 100629154 (+)
G211862 NA non-coding upstream 18305 100618772 ~ 100620204 (+)
G211859 NA non-coding upstream 20825 100596314 ~ 100617684 (+)
G211974 NA non-coding downstream 5790 100662751 ~ 100662967 (+)
G212009 NA non-coding downstream 70440 100727401 ~ 100729565 (+)
G212016 NA non-coding downstream 80337 100737298 ~ 100742133 (+)
G212019 NA non-coding downstream 105802 100762763 ~ 100765529 (+)
G212031 NA non-coding downstream 127992 100784953 ~ 100785344 (+)
G211809 LOC107574289 other upstream 170352 100467678 ~ 100468157 (+)
G211779 NA other upstream 176528 100459657 ~ 100461981 (+)
LOC110500919 LOC106584740 other upstream 738632 99896619 ~ 99899881 (+)
LOC110502581 LOC106561777 other upstream 824134 99777695 ~ 99818794 (+)
G210983 LOC106561766 other upstream 916526 99720179 ~ 99721983 (+)
G212656 NA other downstream 825450 101482181 ~ 101486796 (+)
G212674 NA other downstream 852799 101509760 ~ 101516104 (+)
G212690 NA other downstream 897424 101554385 ~ 101561158 (+)
G212863 NA other downstream 1085938 101742899 ~ 101745974 (+)
G213051 NA other downstream 1520448 102177409 ~ 102177918 (+)

Expression


Co-expression Network