G212016


Basic Information

Item Value
gene id G212016
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 100737298 ~ 100742133 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU240537
atGTAGAATACAGGGATGTAATAGTATGGttgccttgactagaatacagtacttACATATAAAGTggataaaacagtatgtaaacagtattaaagggaccagtgttccattattaaagtgaccagtgttccattattaaagtgaccagtgttccattattaaagtggccagtgttccattattaaagtgaccagtgttccattattaaagggaccagtgttccattgttaaagggaccagtgttccattattaaagggaccagtgttccattattaaagtgaccagtgttccattattaaagggaccagtgttccattattaaagtgaccagtgttccattattaaagggaccagtgttccattattaaagggaccagtgttccattattaaagtgactagtgttccattattaaagtgaccagtgttccattattaaagtgaccagtgttccattaataaagtgaccagtgctccattaataaagtgaccagtgttccattaataaagtgaccagtgttccattattaaagggaccagtgttccattattaaagggaccagtgttccattattaaagtgaccagtgttcaattattaaagtgactagtgttccattattaaagtgactagtgttccattattaaagtgaccagtgttccactattaaagtgaccagtgctccgttattaaagtgaccagtgttccattgttaaagtgaccagtgctcCGTtaataaagtggccagtgttccattaataaagtgaccagtgttccattaataaagtgaccagtgttccattattaaagtgaccagtgttccattattaaagggaccagtgctcaattaataaagtgaccagtgctccattaataaagtgaccagtgttccatttttaagtgaccagtgttccattattaaagtgaccagtgttccattattaaagtgaccagtgttccattattaaagtgaccagtgttccattattaaagtgaccagtgttccattattaaagtgaccagtgttccattattaaagtgaccagtgttccattattaaagtgaccaaggattccatgtctatagggcagcagcctctaaggttcaGTG

Function

NR:

description
Pol-RFamide neuropeptide

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU240537 True 1108 lncRNA 0.37 3 100737298 100742133

Neighbor

gene id symbol gene type direction distance location
sigirr sigirr coding upstream 81692 100638574 ~ 100655606 (+)
LOC110501156 LOC106567469 coding upstream 293062 100438486 ~ 100444236 (+)
LOC118936889 NA coding upstream 318124 100417074 ~ 100419174 (+)
LOC110501220 NA coding upstream 385352 100342550 ~ 100351946 (+)
slc5a12 slc5a12 coding upstream 528075 100177192 ~ 100209223 (+)
LOC110502612 LOC106584763 coding downstream 43398 100785531 ~ 100848341 (+)
LOC118936893 NA coding downstream 106041 100848174 ~ 100860603 (+)
LOC110501031 LOC106592222 coding downstream 187235 100929368 ~ 100964786 (+)
best1 LOC102229874 coding downstream 603152 101345285 ~ 101371174 (+)
LOC110516669 LOC106590745 coding downstream 892497 101634630 ~ 101695484 (+)
G212009 NA non-coding upstream 7733 100727401 ~ 100729565 (+)
G211974 NA non-coding upstream 74331 100662751 ~ 100662967 (+)
G211832 NA non-coding upstream 80337 100638509 ~ 100656961 (+)
G211866 NA non-coding upstream 95959 100639822 ~ 100641339 (+)
G211865 NA non-coding upstream 99622 100637372 ~ 100637676 (+)
G212019 NA non-coding downstream 20630 100762763 ~ 100765529 (+)
G212031 NA non-coding downstream 42820 100784953 ~ 100785344 (+)
G212065 NA non-coding downstream 89487 100831620 ~ 100832042 (+)
G212027 NA non-coding downstream 118524 100860657 ~ 100862034 (+)
G211809 LOC107574289 other upstream 269141 100467678 ~ 100468157 (+)
G211779 NA other upstream 275317 100459657 ~ 100461981 (+)
LOC110500919 LOC106584740 other upstream 837421 99896619 ~ 99899881 (+)
LOC110502581 LOC106561777 other upstream 922923 99777695 ~ 99818794 (+)
G210983 LOC106561766 other upstream 1015315 99720179 ~ 99721983 (+)
G212656 NA other downstream 740278 101482181 ~ 101486796 (+)
G212674 NA other downstream 767627 101509760 ~ 101516104 (+)
G212690 NA other downstream 812252 101554385 ~ 101561158 (+)
G212863 NA other downstream 1000766 101742899 ~ 101745974 (+)
G213051 NA other downstream 1435276 102177409 ~ 102177918 (+)

Expression


Co-expression Network