Gene
RNA
| Item | Value |
|---|---|
| gene id | G212122 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 100974227 ~ 100974671 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU240696 | True | 270 | lncRNA | 0.47 | 2 | 100974227 | 100974671 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501031 | LOC106592222 | coding | upstream | 9441 | 100929368 ~ 100964786 (+) |
| LOC118936893 | NA | coding | upstream | 114965 | 100848174 ~ 100860603 (+) |
| LOC110502612 | LOC106584763 | coding | upstream | 125886 | 100785531 ~ 100848341 (+) |
| sigirr | sigirr | coding | upstream | 318621 | 100638574 ~ 100655606 (+) |
| LOC110501156 | LOC106567469 | coding | upstream | 529991 | 100438486 ~ 100444236 (+) |
| best1 | LOC102229874 | coding | downstream | 370614 | 101345285 ~ 101371174 (+) |
| LOC110516669 | LOC106590745 | coding | downstream | 659959 | 101634630 ~ 101695484 (+) |
| LOC110502669 | LOC107698134 | coding | downstream | 1063367 | 102038038 ~ 102167821 (+) |
| LOC110501421 | LOC106561865 | coding | downstream | 1209688 | 102184359 ~ 102238260 (+) |
| LOC110501429 | LOC106561864 | coding | downstream | 1287446 | 102262117 ~ 102278883 (+) |
| G212121 | NA | non-coding | upstream | 3245 | 100970658 ~ 100970982 (+) |
| G212092 | LOC106591208 | non-coding | upstream | 6938 | 100965476 ~ 100967289 (+) |
| G212028 | NA | non-coding | upstream | 110015 | 100863139 ~ 100864212 (+) |
| G212029 | NA | non-coding | upstream | 111721 | 100862168 ~ 100862506 (+) |
| G212027 | NA | non-coding | upstream | 112193 | 100860657 ~ 100862034 (+) |
| G212129 | NA | non-coding | downstream | 23552 | 100998223 ~ 100998855 (+) |
| G212135 | NA | non-coding | downstream | 58749 | 101033420 ~ 101033694 (+) |
| G212136 | NA | non-coding | downstream | 68407 | 101043078 ~ 101050590 (+) |
| G212149 | NA | non-coding | downstream | 110580 | 101085251 ~ 101088935 (+) |
| G212157 | NA | non-coding | downstream | 120914 | 101095585 ~ 101176257 (+) |
| G211809 | LOC107574289 | other | upstream | 506070 | 100467678 ~ 100468157 (+) |
| G211779 | NA | other | upstream | 512246 | 100459657 ~ 100461981 (+) |
| LOC110500919 | LOC106584740 | other | upstream | 1074350 | 99896619 ~ 99899881 (+) |
| LOC110502581 | LOC106561777 | other | upstream | 1159852 | 99777695 ~ 99818794 (+) |
| G210983 | LOC106561766 | other | upstream | 1252244 | 99720179 ~ 99721983 (+) |
| G212656 | NA | other | downstream | 507740 | 101482181 ~ 101486796 (+) |
| G212674 | NA | other | downstream | 535089 | 101509760 ~ 101516104 (+) |
| G212690 | NA | other | downstream | 579714 | 101554385 ~ 101561158 (+) |
| G212863 | NA | other | downstream | 768228 | 101742899 ~ 101745974 (+) |
| G213051 | NA | other | downstream | 1202738 | 102177409 ~ 102177918 (+) |
