G212190


Basic Information

Item Value
gene id G212190
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 101156265 ~ 101223344 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU240786
agagtagtgatacttcagctagagtagtgatacttcagctagaacagagtagtgatacttcagatagagaagtgatacttcagatagaacagagtagtgatatttcagatagaacagagtagtgatacttcagctagagtagtgatacttcagatagaacagagtagtgatacttcagatagaatagagtagtgataattcagatagaacagagtagtgatacttcagatagagtagtgatacttcagatagaacagagtagtgataCTTCAGatagagtagtgatacttcagatagaacagagtagtgatacttcagatagaacagagtagtgatacttcagatagaacagagtagtgatacttcagatagagtagtgatacttcagatagagtagtgatacttcagatagaacacagtagtgatacttcagatagaacagagtagtg
>TU240784
aacagagtagtgatacttcagatagaacagagtagtgatacttcagatagagtagtgatacttcagatagaacagagtagtgatacttcagatagagtagtgatacttcagatagaacagagtagtgataCTTCAGatagagtagtgatacttcagatagaacagagtagtgatacttcagatagaacagagtagtgatacttcagatagaacagagtagtgatacttcagatagagtagtgatacttcagatagagtagtgatacttcagatagaacacagtagtgatacttcagatagaacagagtagtg
>TU240782
gtgatacttcagaaataacagagtagtgatacttcagatagaacagagtagtgatacttcagatagaatagagtagtgatacttcagaaataacagagtagtgatacttcagatagaacagagtagtgatacttcagatagaacagagtagtgatacttcagattgaacagagtagtgatacttcagatagaacagagtagtgatacttcagatagaacagagtagtgatacttcagatagagtagtgatacttcagatagaacagagtagtgatacttcagatagagtagtgatacttcagatagaacagagtagtgatacttcagatagagtagtgatacttcagatagaacagagtagtgataCTTCAGatagagtagtgatacttcagatagaacagagtagtgatacttcagatagaacagagtagtgatacttcagatagaacagagtagtgatacttcagatagagtagtgatacttcagatagagtagtgatacttcagatagaacacagtagtgatacttcagatagaacagagtagtg
>TU240785
gtgatacttcagaaataacagagtagtgatacttcagatagaacagagtagtgatacttcagatagagtagtgatacttcagatagaacagagtagtgatacttcagatagagtagtgatacttcagatagaacagagtagtgatacttcagatagaacagagtagtgatacttcagatagaacagagtagtgatacttcagatagaacagagtagtgatacttcagatagagtagtgatacttcagatagagtagtgatacttcagatagaacacagtagtgatacttcagatagaacagagtagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU240786 False 449 lncRNA 0.36 5 101156265 101223344
TU240784 False 312 lncRNA 0.36 3 101156712 101223344
TU240782 False 548 lncRNA 0.35 3 101157026 101223344
TU240785 True 308 lncRNA 0.38 4 101157026 101223344

Neighbor

gene id symbol gene type direction distance location
LOC110501031 LOC106592222 coding upstream 191479 100929368 ~ 100964786 (+)
LOC118936893 NA coding upstream 297003 100848174 ~ 100860603 (+)
LOC110502612 LOC106584763 coding upstream 307924 100785531 ~ 100848341 (+)
sigirr sigirr coding upstream 500659 100638574 ~ 100655606 (+)
LOC110501156 LOC106567469 coding upstream 712029 100438486 ~ 100444236 (+)
best1 LOC102229874 coding downstream 121941 101345285 ~ 101371174 (+)
LOC110516669 LOC106590745 coding downstream 411286 101634630 ~ 101695484 (+)
LOC110502669 LOC107698134 coding downstream 814694 102038038 ~ 102167821 (+)
LOC110501421 LOC106561865 coding downstream 961015 102184359 ~ 102238260 (+)
LOC110501429 LOC106561864 coding downstream 1038773 102262117 ~ 102278883 (+)
G212149 NA non-coding upstream 67330 101085251 ~ 101088935 (+)
G212136 NA non-coding upstream 105675 101043078 ~ 101050590 (+)
G212135 NA non-coding upstream 122571 101033420 ~ 101033694 (+)
G212129 NA non-coding upstream 157410 100998223 ~ 100998855 (+)
G212122 NA non-coding upstream 181594 100974227 ~ 100974671 (+)
G212459 NA non-coding downstream 9455 101232799 ~ 101233009 (+)
G212463 NA non-coding downstream 10520 101233864 ~ 101268976 (+)
G212464 NA non-coding downstream 15144 101238488 ~ 101286537 (+)
G212467 NA non-coding downstream 15642 101238986 ~ 101239672 (+)
G212507 NA non-coding downstream 84928 101308272 ~ 101310677 (+)
G211809 LOC107574289 other upstream 688108 100467678 ~ 100468157 (+)
G211779 NA other upstream 694284 100459657 ~ 100461981 (+)
LOC110500919 LOC106584740 other upstream 1256388 99896619 ~ 99899881 (+)
LOC110502581 LOC106561777 other upstream 1341890 99777695 ~ 99818794 (+)
G210983 LOC106561766 other upstream 1434282 99720179 ~ 99721983 (+)
G212656 NA other downstream 259067 101482181 ~ 101486796 (+)
G212674 NA other downstream 286416 101509760 ~ 101516104 (+)
G212690 NA other downstream 331041 101554385 ~ 101561158 (+)
G212863 NA other downstream 519555 101742899 ~ 101745974 (+)
G213051 NA other downstream 954065 102177409 ~ 102177918 (+)

Expression


Co-expression Network